Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 7.8e-186 654.1 436 100.0
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 1.8e-158 563.1 449 79.1
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 1.2e-157 560.5 439 90.7
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 1.3e-143 513.8 446 73.3
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 2.1e-138 496.5 449 69.7
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 9.6e-136 487.6 471 68.4
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 1.4e-134 483.8 267 85.0
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 2.4e-134 483.0 267 84.3
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.0e-132 477.6 261 85.1
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 1.7e-132 476.9 412 71.1
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 2.9e-132 476.1 261 84.3
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 1.1e-131 474.2 259 85.3
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 9.3e-131 471.1 261 83.9
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 9.3e-131 471.1 261 83.9
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 9.3e-131 471.1 261 84.7
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 1.2e-130 470.7 259 83.8
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 2.7e-130 469.5 261 82.8
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 4.6e-130 468.8 261 83.5
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 2.3e-129 466.5 259 81.5
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 6.7e-129 464.9 261 82.8
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 6.7e-129 464.9 259 84.2
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 1.1e-128 464.2 259 82.6
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 1.1e-128 464.2 261 83.1
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 7.4e-128 461.5 263 81.7
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 1.3e-127 460.7 259 81.9
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 2.2e-127 459.9 262 82.1
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 2.8e-127 459.5 262 82.1
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 8.2e-127 458.0 260 81.5
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 1.1e-126 457.6 255 82.4
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 1.4e-126 457.2 260 81.2
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 1.4e-126 457.2 259 81.1
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 1.8e-126 456.8 260 81.2
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 2.4e-126 456.4 262 82.1
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 4.1e-126 455.7 259 81.1
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 5.3e-126 455.3 260 80.0
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 9.0e-126 454.5 260 80.4
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 9.0e-126 454.5 255 82.4
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 1.2e-125 454.1 259 81.9
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 1.2e-125 454.1 260 81.5
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 3.4e-125 452.6 255 80.4
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 3.4e-125 452.6 259 81.1
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 5.9e-125 451.8 255 80.4
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 5.9e-125 451.8 258 80.6
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.0e-124 451.1 261 80.5
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 2.2e-124 449.9 261 80.1
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 2.9e-124 449.5 259 80.7
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 2.9e-124 449.5 259 81.1
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 3.8e-124 449.1 252 80.6
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 3.8e-124 449.1 259 79.5
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 3.8e-124 449.1 255 80.0
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 6.5e-124 448.4 262 79.8
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 1.1e-123 447.6 259 80.3
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 1.4e-123 447.2 255 79.6
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 1.9e-123 446.8 262 79.8
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 4.2e-123 445.7 259 79.9
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 4.2e-123 445.7 261 78.2
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 9.4e-123 444.5 259 79.9
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 3.6e-122 442.6 260 77.7
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 3.6e-122 442.6 252 79.4
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 6.1e-122 441.8 252 81.7
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 7.9e-122 441.4 259 79.9
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 3.9e-121 439.1 260 77.7
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 8.8e-121 438.0 254 80.3
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 8.8e-121 438.0 262 79.0
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 1.1e-120 437.6 260 78.5
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 1.1e-120 437.6 258 78.3
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 2.0e-120 436.8 252 81.3
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 2.0e-120 436.8 259 79.2
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 4.3e-120 435.6 262 77.5
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 5.7e-120 435.3 260 77.3
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 5.7e-120 435.3 260 78.1
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 7.4e-120 434.9 255 77.3
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 9.7e-120 434.5 255 78.4
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 1.7e-119 433.7 259 77.6
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 3.7e-119 432.6 252 77.0
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 3.7e-119 432.6 260 77.3
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 4.8e-119 432.2 282 73.4
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 6.3e-119 431.8 260 76.9
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 1.4e-118 430.6 261 77.4
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.8e-118 430.3 252 78.6
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 1.8e-118 430.3 260 76.9
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 1.8e-118 430.3 262 77.1
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 4.1e-118 429.1 260 76.5
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 1.2e-117 427.6 258 76.7
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 1.2e-117 427.6 262 76.7
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 1.2e-117 427.6 255 76.5
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 2.6e-117 426.4 252 78.6
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 3.4e-117 426.0 260 76.2
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 4.5e-117 425.6 255 78.0
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 5.9e-117 425.2 238 82.8
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 1.0e-116 424.5 260 75.4
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 1.3e-116 424.1 259 75.7
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.7e-116 423.7 256 76.2
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 8.5e-116 421.4 260 74.2
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 8.5e-116 421.4 253 76.3
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.4e-115 420.6 251 76.9
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 9.4e-115 417.9 266 76.3
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 2.1e-114 416.8 263 71.9
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 7.9e-114 414.8 238 81.9
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.4e-113 414.1 261 73.2
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 6.7e-113 411.8 252 73.4
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 6.7e-113 411.8 262 75.6
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 2.8e-111 406.4 264 73.1
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 3.7e-111 406.0 261 75.1
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 2.4e-110 403.3 257 73.9
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 2.0e-109 400.2 262 72.1
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 1.7e-108 397.1 320 63.1
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 4.7e-106 389.0 301 61.8
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.0e-105 386.3 261 70.9
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 4.1e-102 375.9 227 78.4
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 2.0e-101 373.6 212 82.5
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 3.5e-101 372.9 259 68.3
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 5.5e-99 365.5 257 70.4
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 1.2e-98 364.4 268 64.6
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.8e-97 360.5 211 77.3
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 9.8e-96 354.8 201 78.6
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.6e-90 337.4 253 61.3
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 2.1e-90 337.0 261 59.0
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 6.1e-90 335.5 364 64.3
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 5.2e-89 332.4 270 57.0
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 1.1e-86 324.7 183 81.4
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 1.2e-85 321.2 364 65.7
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 1.2e-85 321.2 364 65.7
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 6.8e-81 305.4 191 77.0
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 4.4e-80 302.8 176 81.2
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.2e-79 300.4 245 59.2
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 3.7e-79 299.7 251 59.4
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 4.9e-79 299.3 249 59.8
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.7e-76 290.8 173 78.0
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.1e-75 288.1 170 79.4
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.5e-75 287.7 171 78.4
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 5.2e-73 279.3 226 61.1
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 3.4e-72 276.6 242 58.3
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 2.7e-69 266.9 172 73.8
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 3.6e-66 256.5 263 51.0
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 8.9e-65 251.9 242 51.7
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.6e-61 241.1 196 56.1
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 2.1e-58 230.7 191 59.7
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 3.7e-55 219.9 263 46.0
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 7.1e-54 215.7 178 57.3
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 3.5e-53 213.4 180 60.0
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 6.0e-53 212.6 128 80.5
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 1.1e-49 201.8 232 49.1
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 1.8e-49 201.1 223 46.6
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.2e-48 198.4 115 80.9
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 1.5e-48 198.0 111 83.8
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 1.9e-46 191.0 249 42.6
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 1.9e-43 181.0 170 53.5
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 4.9e-39 166.4 128 60.9
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 8.4e-39 165.6 124 60.5
Psat7g172360 Pisum sativum HOM05D004797 ORTHO05D005752 6.0e-37 159.5 86 81.4
Migut.L00818 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.8e-28 131.3 79 72.2
unitig_60.g25645 Utricularia gibba HOM05D004797 ORTHO05D005752 1.6e-13 81.6 60 63.3
QL06p032345 Quercus lobata HOM05D004797 ORTHO05D050637 4.6e-13 80.1 49 71.4
QL93p0275_0020 Quercus lobata HOM05D004797 ORTHO05D050637 4.6e-13 80.1 49 71.4
TPR.G8938 Trifolium pratense HOM05D004797 ORTHO05D005752 1.3e-10 72.0 101 51.5
Pp3c19_1530 Physcomitrium patens HOM05D003906 ORTHO05D004776 1.0e-07 62.4 162 27.2


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