Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G068900 Glycine max HOM05D013452 ORTHO05D013216 4.0e-133 478.4 297 100.0
Phvul.002G031100 Phaseolus vulgaris HOM05D013452 ORTHO05D013216 3.2e-50 203.0 341 46.0
VMungo1077G0001 Vigna mungo HOM05D013452 ORTHO05D013216 6.1e-41 172.2 185 67.0
TPR.G21443 Trifolium pratense HOM05D013452 ORTHO05D013216 2.2e-35 153.7 355 46.8
Lalb_Chr09g0322311 Lupinus albus HOM05D013452 ORTHO05D013216 5.5e-34 149.1 357 46.8
Ca_24855_v3 Cicer arietinum L. HOM05D013452 ORTHO05D013216 8.6e-27 125.2 310 42.3
Glyma.01G174102 Glycine max HOM05D013452 ORTHO05D013216 8.6e-27 125.2 116 73.3
Medtr5g020520 Medicago truncatula HOM05D013452 ORTHO05D013216 5.2e-24 115.9 342 39.8
Lj2g0010277 Lotus japonicus HOM05D013452 ORTHO05D013216 9.8e-23 111.7 328 42.4
arahy.Tifrunner.gnm1.ann1.JE9L1P Arachis hypogaea HOM05D026528 ORTHO05D013216 6.3e-22 109.0 370 36.2
arahy.Tifrunner.gnm1.ann1.32CIDB Arachis hypogaea HOM05D026528 ORTHO05D013216 1.2e-17 94.7 182 40.1
arahy.Tifrunner.gnm1.ann1.94NHE4 Arachis hypogaea HOM05D013452 ORTHO05D013216 7.5e-15 85.5 63 71.4
Psat2g158920 Pisum sativum HOM05D013452 ORTHO05D013216 8.3e-14 82.0 91 59.3
CiPaw.11G175700 Carya illinoinensis HOM05D009163 ORTHO05D010445 4.1e-13 79.7 310 35.5
CiPaw.01G040400 Carya illinoinensis HOM05D009163 ORTHO05D010445 9.5e-10 68.6 322 34.2
vmacro17825 Vaccinium macrocarpon HOM05D009163 ORTHO05D010445 2.1e-09 67.4 315 33.3
THA.LOC104807843 Tarenaya hassleriana HOM05D009606 ORTHO05D011759 2.8e-09 67.0 294 27.9
Dinv13520 Davidia involucrata HOM05D009163 ORTHO05D010445 3.6e-09 66.6 167 32.3
Medtr8g077340 Medicago truncatula HOM05D023582 ORTHO05D021493 3.6e-09 66.6 118 39.8
Lalb_Chr16g0391111 Lupinus albus HOM05D023582 ORTHO05D021493 4.7e-09 66.2 92 42.4
FAN28G1327 Fragaria x ananassa HOM05D018124 ORTHO05D019096 8.0e-09 65.5 88 47.7
FAN28G1332 Fragaria x ananassa HOM05D018124 ORTHO05D019096 8.0e-09 65.5 88 47.7
Ca_22316_v3 Cicer arietinum L. HOM05D023582 ORTHO05D021493 2.3e-08 63.9 75 45.3
FAN26G1512 Fragaria x ananassa HOM05D018124 ORTHO05D019096 3.1e-08 63.5 88 47.7
Gohir.D12G064500 Gossypium hirsutum HOM05D019098 ORTHO05D025280 4.0e-08 63.2 94 42.6
arahy.Tifrunner.gnm1.ann1.IQB66G Arachis hypogaea HOM05D013452 ORTHO05D013216 5.2e-08 62.8 43 74.4
Duzib187G1372 Durio zibethinus HOM05D019098 ORTHO05D025280 5.2e-08 62.8 40 82.5
Duzib147G1474 Durio zibethinus HOM05D019098 ORTHO05D019096 6.8e-08 62.4 40 82.5
TPR.G24097 Trifolium pratense HOM05D023582 ORTHO05D021493 6.8e-08 62.4 91 42.9
Ah.03g140950 Amaranthus hybridus HOM05D020462 ORTHO05D021197 8.9e-08 62.0 69 53.6
Actinidia19192 Actinidia chinensis HOM05D009163 ORTHO05D010445 2.0e-07 60.8 343 27.1
Gohir.A12G064600 Gossypium hirsutum HOM05D019098 ORTHO05D025280 2.6e-07 60.5 83 43.4
Gorai.008G067600 Gossypium raimondii HOM05D019098 ORTHO05D025280 3.4e-07 60.1 94 40.4
GSVIVG01018946001 Vitis vinifera HOM05D009163 ORTHO05D010445 3.4e-07 60.1 100 39.0
FAN23G2557 Fragaria x ananassa HOM05D018124 ORTHO05D019096 4.4e-07 59.7 131 35.1
COL.COLO4_22063 Corchorus olitorius HOM05D019098 ORTHO05D013216 7.5e-07 58.9 320 35.3
Oeu042269.2 Olea europaea HOM05D009163 ORTHO05D010445 9.8e-07 58.5 103 35.0
RcHm_v2.0_Chr2g0101381 Rosa chinensis HOM05D018124 ORTHO05D019096 1.3e-06 58.2 127 35.4
Thecc.01G034000 Theobroma cacao HOM05D019098 ORTHO05D025280 1.3e-06 58.2 40 75.0
ClCG07G008530 Citrullus lanatus HOM05D015520 ORTHO05D010445 2.9e-06 57.0 108 31.5
Oeu033653.1 Olea europaea HOM05D009163 ORTHO05D010445 3.7e-06 56.6 88 38.6
arahy.Tifrunner.gnm1.ann1.B450KS Arachis hypogaea HOM05D048152 ORTHO05D021493 8.3e-06 55.5 65 44.6
CSS0010032 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 8.3e-06 55.5 44 63.6


User provided reference genes

Program Settings