Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 3.6e-58 228.0 115 100.0
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 1.3e-34 149.8 127 70.1
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.8e-33 146.0 128 68.8
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 5.8e-32 141.0 126 67.5
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 8.4e-31 137.1 125 64.8
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.1e-30 136.7 127 63.0
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.6e-29 132.9 125 64.8
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 2.8e-26 122.1 136 57.4
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 1.8e-25 119.4 136 58.1
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 1.4e-22 109.8 125 55.2
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.4e-22 109.8 127 52.8
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 3.2e-22 108.6 118 51.7
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 4.2e-22 108.2 123 53.7
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 7.2e-22 107.5 119 53.8
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 7.2e-22 107.5 131 55.7
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.2e-21 106.7 129 52.7
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.6e-21 106.3 109 59.6
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.7e-21 105.5 130 50.8
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 3.5e-21 105.1 124 54.8
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 7.9e-21 104.0 122 51.6
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 1.3e-20 103.2 130 50.0
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 3.0e-20 102.1 127 50.4
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 3.9e-20 101.7 120 52.5
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 3.9e-20 101.7 119 52.9
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 3.9e-20 101.7 119 52.9
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 3.9e-20 101.7 112 56.2
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 5.1e-20 101.3 131 50.4
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 1.1e-19 100.1 119 52.9
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.1e-19 100.1 98 62.2
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 1.5e-19 99.8 133 48.9
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 3.3e-19 98.6 114 52.6
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 4.3e-19 98.2 119 52.1
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 4.3e-19 98.2 119 52.1
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 5.7e-19 97.8 134 51.5
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 2.2e-18 95.9 96 59.4
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.2e-18 95.9 128 48.4
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.8e-18 95.5 84 64.3
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 3.7e-18 95.1 117 51.3
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 4.8e-18 94.7 113 53.1
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.8e-18 94.7 113 53.1
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 8.2e-18 94.0 135 45.9
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 1.1e-17 93.6 101 58.4
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-17 93.6 113 52.2
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 2.4e-17 92.4 126 48.4
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 4.1e-17 91.7 132 48.5
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 4.1e-17 91.7 81 67.9
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 4.1e-17 91.7 106 50.9
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 5.3e-17 91.3 131 48.9
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 5.3e-17 91.3 132 50.8
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 9.0e-17 90.5 96 55.2
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.5e-16 89.7 128 47.7
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-16 89.4 125 48.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 2.0e-16 89.4 123 46.3
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 2.6e-16 89.0 128 43.8
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.4e-16 88.6 128 44.5
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.4e-16 88.6 89 58.4
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 4.5e-16 88.2 112 50.0
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.5e-16 88.2 130 43.8
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.5e-16 88.2 84 59.5
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 4.5e-16 88.2 128 44.5
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 5.9e-16 87.8 128 46.9
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 7.7e-16 87.4 89 57.3
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 7.7e-16 87.4 80 67.5
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.0e-15 87.0 109 54.1
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.3e-15 86.7 86 59.3
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 2.2e-15 85.9 82 61.0
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.9e-15 85.5 121 47.9
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.9e-15 85.5 121 47.9
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 2.9e-15 85.5 115 51.3
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 2.9e-15 85.5 131 44.3
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 3.8e-15 85.1 93 51.6
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 6.5e-15 84.3 119 51.3
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 6.5e-15 84.3 96 52.1
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 6.5e-15 84.3 96 52.1
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.1e-14 83.6 135 46.7
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.1e-14 83.6 90 55.6
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.4e-14 83.2 127 47.2
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.9e-14 82.8 153 39.2
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 2.5e-14 82.4 138 44.2
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.5e-14 82.4 67 68.7
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 7.2e-14 80.9 68 66.2
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 7.2e-14 80.9 63 69.8
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 7.2e-14 80.9 63 69.8
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 7.2e-14 80.9 119 51.3
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 9.4e-14 80.5 123 48.0
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 9.4e-14 80.5 62 67.7
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 1.2e-13 80.1 119 44.5
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 2.1e-13 79.3 68 63.2
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 2.7e-13 79.0 76 61.8
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 3.6e-13 78.6 78 59.0
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 4.6e-13 78.2 80 61.2
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 4.6e-13 78.2 74 59.5
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 6.1e-13 77.8 81 55.6
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 7.9e-13 77.4 105 47.6
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.0e-12 77.0 129 41.9
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 1.0e-12 77.0 119 44.5
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.8e-12 76.3 126 42.1
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 2.3e-12 75.9 124 41.9
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 5.1e-12 74.7 62 62.9
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 8.8e-12 73.9 62 66.1
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 1.5e-11 73.2 78 55.1
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.5e-11 73.2 100 44.0
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.0e-11 72.8 87 50.6
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 2.0e-11 72.8 95 50.5
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 3.3e-11 72.0 85 52.9
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 4.3e-11 71.6 103 45.6
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 4.3e-11 71.6 95 50.5
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 4.3e-11 71.6 93 50.5
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 5.7e-11 71.2 87 48.3
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 3.7e-10 68.6 104 46.2
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 6.9e-09 64.3 85 47.1
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 4.5e-08 61.6 62 56.5
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 1.0e-07 60.5 91 46.2
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 6.5e-07 57.8 53 56.6
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 6.5e-07 57.8 108 39.8
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 6.5e-07 57.8 51 58.8
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 3.2e-06 55.5 50 62.0
Eucgr.K01402 Eucalyptus grandis HOM05D006100 ORTHO05D007539 4.2e-06 55.1 128 35.2
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 5.5e-06 54.7 78 46.2


User provided reference genes

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