Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G060500 Glycine max HOM05D008334 ORTHO05D010366 7.5e-47 190.3 103 100.0
Glyma.01G182200 Glycine max HOM05D008334 ORTHO05D010366 2.3e-32 142.1 84 92.9
VMungo1215G2475 Vigna mungo HOM05D008334 ORTHO05D010366 2.0e-31 139.0 103 74.8
Phvul.002G023200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 2.7e-28 128.6 103 70.9
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 7.6e-23 110.5 103 62.1
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 1.1e-21 106.7 103 61.2
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 2.4e-21 105.5 103 61.2
arahy.Tifrunner.gnm1.ann1.HXSC1S Arachis hypogaea HOM05D008334 ORTHO05D010366 4.3e-18 94.7 107 58.9
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 6.9e-16 87.4 106 53.8
Glyma.16G144100 Glycine max HOM05D008334 ORTHO05D010366 4.4e-15 84.7 108 50.9
Medtr8g078960 Medicago truncatula HOM05D008334 ORTHO05D010366 1.4e-13 79.7 114 48.2
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 4.2e-13 78.2 108 50.0
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 1.6e-12 76.3 109 47.7
Psat0s4220g0080 Pisum sativum HOM05D008334 ORTHO05D010366 1.6e-12 76.3 114 47.4
VMungo0251G2655 Vigna mungo HOM05D008334 ORTHO05D010366 1.7e-11 72.8 107 46.7
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 6.6e-11 70.9 112 42.9
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 8.7e-11 70.5 104 46.2
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 2.5e-10 68.9 111 45.9
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 4.3e-10 68.2 103 44.7
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 1.3e-09 66.6 108 41.7
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 1.6e-09 66.2 111 40.5
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 2.8e-09 65.5 114 43.0
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 4.8e-09 64.7 104 37.5
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 4.8e-09 64.7 105 41.9
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 8.1e-09 63.9 109 41.3
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 1.8e-08 62.8 109 40.4
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 1.8e-08 62.8 108 40.7
arahy.Tifrunner.gnm1.ann1.LQA8Z5 Arachis hypogaea HOM05D008334 ORTHO05D010366 2.4e-08 62.4 107 45.8
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 3.1e-08 62.0 114 41.2
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 4.0e-08 61.6 113 40.7
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 4.0e-08 61.6 108 41.7
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 6.9e-08 60.8 113 41.6
Phvul.003G249200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 6.9e-08 60.8 106 41.5
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 1.5e-07 59.7 104 37.5
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 1.5e-07 59.7 106 35.8
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 2.0e-07 59.3 108 39.8
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 3.4e-07 58.5 108 39.8
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 7.6e-07 57.4 92 38.0
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 7.6e-07 57.4 108 40.7
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 9.9e-07 57.0 103 40.8
Rhsim08G0109000 Rhododendron simsii HOM05D008334 ORTHO05D010366 3.8e-06 55.1 103 36.9
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 3.8e-06 55.1 108 38.0


User provided reference genes

Program Settings