Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G051300 Glycine max HOM05D008801 ORTHO05D010819 2.8e-49 199.5 234 100.0
Glyma.01G190900 Glycine max HOM05D008801 ORTHO05D010819 2.9e-38 162.9 242 84.7
Phvul.002G014100 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 2.0e-26 123.6 75 86.7
VMungo1215G0318 Vigna mungo HOM05D008801 ORTHO05D010819 3.3e-26 122.9 78 87.2
arahy.Tifrunner.gnm1.ann1.N2JMJ4 Arachis hypogaea HOM05D008801 ORTHO05D010819 5.0e-22 109.0 89 73.0
Ca_24714_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 8.5e-22 108.2 86 76.7
Ca_24729_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 8.5e-22 108.2 86 76.7
arahy.Tifrunner.gnm1.ann1.EBVI20 Arachis hypogaea HOM05D008801 ORTHO05D010819 1.0e-19 101.3 80 72.5
Ciclev10026322m.g Citrus clementina HOM05D008801 ORTHO05D010819 6.3e-17 92.0 85 62.4
Medtr5g016250 Medicago truncatula HOM05D008801 ORTHO05D010819 6.3e-17 92.0 77 70.1
Lalb_Chr16g0378731 Lupinus albus HOM05D008801 ORTHO05D010819 1.4e-16 90.9 234 56.4
TPR.G26876 Trifolium pratense HOM05D008801 ORTHO05D010819 1.4e-16 90.9 78 71.8
Glyma.05G102100 Glycine max HOM05D008801 ORTHO05D010819 4.1e-16 89.4 75 69.3
Phvul.003G238200 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 1.3e-14 84.3 59 79.7
THA.LOC104807612 Tarenaya hassleriana HOM05D008801 ORTHO05D010819 3.2e-13 79.7 79 59.5
Lalb_Chr05g0213471 Lupinus albus HOM05D008801 ORTHO05D010819 5.5e-13 79.0 74 59.5
Carub.0007s0283 Capsella rubella HOM05D010159 ORTHO05D012416 2.1e-12 77.0 85 57.6
Gohir.A11G218200 Gossypium hirsutum HOM05D008801 ORTHO05D010819 3.6e-12 76.3 85 57.6
AT4G37450 Arabidopsis thaliana HOM05D010159 ORTHO05D012416 6.1e-12 75.5 79 58.2
Medtr4g095280 Medicago truncatula HOM05D008801 ORTHO05D010819 6.8e-11 72.0 84 61.9
VMungo0251G0048 Vigna mungo HOM05D008801 ORTHO05D010819 6.8e-11 72.0 59 69.5
Gohir.D12G072500 Gossypium hirsutum HOM05D008801 ORTHO05D010819 1.2e-10 71.2 66 59.1
Gorai.008G079800 Gossypium raimondii HOM05D008801 ORTHO05D010819 1.2e-10 71.2 66 59.1
Duzib187G0657 Durio zibethinus HOM05D008801 ORTHO05D010819 1.5e-10 70.9 85 52.9
Lj2g0006888 Lotus japonicus HOM05D008801 ORTHO05D010819 1.5e-10 70.9 74 66.2
MELO3C007601.2 Cucumis melo HOM05D022074 ORTHO05D028887 2.6e-10 70.1 81 56.8
CSS0031242 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 2.2e-09 67.0 75 52.0
CSS0039488 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 4.9e-09 65.9 75 50.7
Aa31LG6G14310 Aethionema arabicum HOM05D010159 ORTHO05D012416 6.3e-09 65.5 79 55.7
COL.COLO4_11520 Corchorus olitorius HOM05D008801 ORTHO05D010819 8.3e-09 65.1 57 59.6
Thecc.01G067400 Theobroma cacao HOM05D008801 ORTHO05D010819 1.8e-08 63.9 57 61.4
Ca_13935_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 3.1e-08 63.2 57 63.2
Manes.12G113000 Manihot esculenta HOM05D008801 ORTHO05D010819 4.1e-08 62.8 60 56.7
Gohir.A12G067800 Gossypium hirsutum HOM05D008801 ORTHO05D010819 5.4e-08 62.4 59 57.6
Gohir.A12G068100 Gossypium hirsutum HOM05D008801 ORTHO05D010819 5.4e-08 62.4 59 57.6
Gorai.008G079900 Gossypium raimondii HOM05D008801 ORTHO05D010819 5.4e-08 62.4 59 57.6
Duzib264G0993 Durio zibethinus HOM05D008801 ORTHO05D010819 1.2e-07 61.2 57 59.6
Gohir.D12G072600 Gossypium hirsutum HOM05D008801 ORTHO05D010819 4.5e-07 59.3 59 55.9
CARHR245850 Cardamine hirsuta HOM05D010159 ORTHO05D012416 5.9e-07 58.9 59 57.6
CiPaw.01G008400 Carya illinoinensis HOM05D008801 ORTHO05D010819 5.0e-06 55.8 84 50.0
TWI53G1246 Tripterygium wilfordii HOM05D013097 ORTHO05D010819 6.6e-06 55.5 86 57.0
Duzib147G0385 Durio zibethinus HOM05D008801 ORTHO05D010819 8.6e-06 55.1 66 48.5


User provided reference genes

Program Settings