Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 4.3e-175 617.8 306 100.0
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 1.6e-169 599.4 306 96.7
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 9.7e-167 590.1 306 95.4
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.1e-165 586.6 306 95.4
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 8.5e-163 577.0 306 92.5
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 5.5e-162 574.3 306 91.8
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.4e-160 569.7 306 91.5
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 5.1e-160 567.8 306 91.2
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 8.8e-160 567.0 306 90.5
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 2.6e-159 565.5 306 90.5
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 9.7e-159 563.5 306 91.2
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 7.0e-157 557.4 306 88.9
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.7e-152 540.8 306 85.3
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.1e-151 540.0 306 85.6
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 7.4e-151 537.3 306 85.0
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 2.4e-149 532.3 306 84.0
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 1.2e-148 530.0 307 83.4
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 2.6e-148 528.9 306 83.7
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 5.9e-148 527.7 307 84.0
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.7e-147 526.2 306 83.0
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 3.8e-147 525.0 307 83.4
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 83.4
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.9e-146 522.7 306 82.0
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 5.5e-146 521.2 307 84.0
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 9.4e-146 520.4 307 83.1
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.6e-145 519.6 307 82.4
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.7e-145 518.8 307 82.4
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 3.6e-145 518.5 306 81.4
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 4.7e-145 518.1 306 83.3
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 4.7e-145 518.1 307 83.1
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 6.1e-145 517.7 307 80.8
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 6.1e-145 517.7 307 81.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 6.1e-145 517.7 307 82.7
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.8e-144 516.2 307 81.8
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.8e-144 516.2 307 82.7
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.0e-144 515.4 306 80.7
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 3.0e-144 515.4 307 82.1
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 8.8e-144 513.8 307 80.5
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.2e-143 513.5 307 81.4
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 81.4
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 81.4
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 80.8
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 5.7e-143 511.1 307 79.5
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.1e-141 506.9 390 67.4
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.4e-141 506.5 322 77.0
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 7.0e-141 504.2 307 80.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.6e-140 503.1 307 79.2
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 2.7e-140 502.3 306 79.4
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.3e-139 500.0 307 79.8
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.2e-139 499.2 307 76.9
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 78.5
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.1e-138 496.9 307 78.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 3.2e-138 495.4 304 78.3
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 1.6e-137 493.0 307 77.5
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.5e-135 486.5 288 82.6
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 2.6e-135 485.7 370 67.8
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 5.7e-135 484.6 358 69.6
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 7.5e-135 484.2 284 84.5
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 9.8e-135 483.8 307 76.2
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 2.8e-134 482.3 307 75.9
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 2.8e-134 482.3 307 75.6
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.7e-134 481.9 307 75.9
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 7.0e-133 477.6 307 75.2
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 1.6e-132 476.5 307 73.9
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.3e-131 472.6 307 73.9
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.3e-131 472.6 292 81.5
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 6.6e-131 471.1 306 73.2
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 1.9e-130 469.5 307 72.6
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.1e-129 466.1 306 71.9
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 6.1e-129 464.5 371 64.2
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.8e-128 463.0 307 73.0
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.3e-128 462.6 307 72.3
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.3e-128 462.6 276 80.4
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.5e-127 459.9 275 80.4
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.0e-120 437.2 307 71.7
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 1.5e-119 433.3 277 74.7
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 3.7e-118 428.7 293 72.7
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 5.4e-117 424.9 278 73.7
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 2.7e-116 422.5 243 84.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 4.3e-114 415.2 307 67.8
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.5e-114 414.1 304 67.1
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.2e-108 397.1 310 61.9
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 3.9e-107 392.1 310 61.6
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.5e-106 390.2 235 81.7
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.8e-104 383.3 307 65.5
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 6.8e-104 381.3 305 59.3
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 6.6e-99 364.8 236 74.2
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 8.6e-99 364.4 273 64.5
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.4e-80 303.9 316 50.6
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 3.8e-78 295.8 243 62.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 2.1e-73 280.0 190 69.5
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 2.5e-61 240.0 130 86.9
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 5.7e-58 228.8 310 42.9
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.6e-55 219.9 170 68.2
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 3.2e-53 213.0 282 43.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 1.2e-52 211.1 564 29.3
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.6e-52 210.7 148 70.9
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.4e-32 143.7 88 85.2
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.6e-26 123.6 72 84.7
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 7.7e-23 112.1 70 70.0
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 7.2e-21 105.5 221 33.5
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.1e-20 104.0 97 50.5
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 1.6e-07 61.2 53 64.2
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 2.7e-07 60.5 173 30.6
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 1.3e-06 58.2 39 69.2


User provided reference genes

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