Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G048366 Glycine max HOM05D000726 ORTHO05D007554 1.8e-226 788.9 398 100.0
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 4.6e-193 677.9 395 86.6
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 1.5e-164 583.2 396 77.3
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 1.5e-159 566.6 395 75.4
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 9.7e-143 510.8 396 68.7
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 4.1e-141 505.4 408 65.4
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 5.9e-140 501.5 396 66.2
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 5.9e-140 501.5 395 66.6
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 1.1e-135 487.3 396 64.9
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 1.6e-121 440.3 405 58.5
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 1.7e-107 393.7 393 55.5
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 1.1e-98 364.4 394 54.3
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 3.3e-90 336.3 397 48.1
CiPaw.01G005300 Carya illinoinensis HOM05D000726 ORTHO05D007554 5.2e-88 328.9 399 47.4
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 9.9e-87 324.7 398 47.5
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 5.1e-83 312.4 399 45.9
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 1.5e-82 310.8 397 45.3
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 1.2e-81 307.8 397 43.3
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 2.1e-81 307.0 397 44.3
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 6.2e-81 305.4 400 46.8
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 3.1e-80 303.1 391 44.5
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 8.9e-80 301.6 397 45.3
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 8.9e-80 301.6 397 45.3
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 1.5e-79 300.8 397 45.3
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 3.4e-79 299.7 397 43.1
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 3.4e-79 299.7 397 45.1
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 1.3e-78 297.7 397 44.8
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 1.7e-78 297.4 398 42.5
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 3.2e-77 293.1 399 44.1
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 6.6e-75 285.4 400 41.5
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 2.5e-74 283.5 397 41.8
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 3.3e-74 283.1 394 42.4
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.3e-73 281.2 397 41.3
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.8e-73 280.0 395 41.3
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 6.4e-70 268.9 413 39.2
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 2.4e-69 266.9 397 41.6
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 7.1e-69 265.4 397 41.6
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 7.9e-68 261.9 399 40.9
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 3.3e-66 256.5 397 37.5
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 4.3e-66 256.1 399 40.1
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 4.8e-65 252.7 406 39.7
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.4e-64 250.4 384 39.6
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 7.6e-63 245.4 403 39.7
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.2e-62 243.8 384 39.6
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 8.4e-62 241.9 399 39.3
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 1.1e-61 241.5 393 34.4
Cpa.g.sc6.25 Carica papaya HOM05D000726 ORTHO05D007554 5.5e-61 239.2 324 40.4
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 1.8e-59 234.2 400 38.5
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 3.0e-59 233.4 397 35.5
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 1.5e-58 231.1 395 35.9
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 1.9e-58 230.7 395 37.0
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 4.3e-58 229.6 395 36.2
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 5.6e-58 229.2 397 38.8
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 1.6e-57 227.6 395 35.9
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 3.7e-57 226.5 397 35.0
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 8.1e-57 225.3 402 36.3
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 1.8e-56 224.2 397 35.0
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 2.4e-56 223.8 396 35.4
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 6.9e-56 222.2 414 34.8
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 9.0e-56 221.9 368 38.6
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 1.2e-55 221.5 415 34.2
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 3.4e-55 219.9 396 35.4
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 2.2e-54 217.2 393 34.4
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 2.2e-54 217.2 399 32.8
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.9e-54 216.9 393 34.1
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 8.4e-54 215.3 393 32.6
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 8.4e-54 215.3 397 35.0
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 3.2e-53 213.4 397 35.0
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 4.2e-53 213.0 396 31.8
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 5.5e-53 212.6 399 34.3
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 9.3e-53 211.8 395 33.2
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 9.3e-53 211.8 400 34.8
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 1.2e-52 211.5 395 32.4
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 4.6e-52 209.5 402 31.6
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 6.0e-52 209.1 395 34.9
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 1.0e-51 208.4 397 33.5
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 6.7e-51 205.7 395 32.9
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 1.9e-50 204.1 399 32.8
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 9.6e-50 201.8 399 32.3
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 1.4e-48 198.0 397 35.8
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 1.0e-46 191.8 401 31.9
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 3.2e-45 186.8 401 30.7
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 4.2e-45 186.4 402 30.8
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 6.1e-44 182.6 393 28.5
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 2.3e-43 180.6 409 33.0
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 3.0e-43 180.3 348 35.3
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 6.7e-43 179.1 335 32.5
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 2.5e-42 177.2 284 39.4
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 3.3e-42 176.8 395 29.4
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 4.8e-41 172.9 394 31.0
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 1.1e-40 171.8 390 29.7
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 3.1e-40 170.2 344 34.3
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 9.0e-40 168.7 398 31.2
Nn1g04578 Nelumbo nucifera HOM05D000726 ORTHO05D007554 2.9e-38 163.7 298 34.2
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 1.4e-37 161.4 404 29.7
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 9.4e-37 158.7 396 28.8
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 7.9e-36 155.6 407 30.5
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 2.7e-28 130.6 393 28.0
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 2.6e-23 114.0 203 36.9
ATR0208G027 Amborella trichopoda HOM05D000726 ORTHO05D007554 5.0e-22 109.8 255 33.3
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 7.7e-15 85.9 141 39.0
Nn1g04577 Nelumbo nucifera HOM05D000726 ORTHO05D007554 1.2e-12 78.6 68 50.0
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 6.8e-11 72.8 133 39.1
Glyma.08G243550 Glycine max HOM05D000726 ORTHO05D025659 2.0e-10 71.2 42 73.8
SEGI_23696 Sequoiadendron giganteum HOM05D000726 ORTHO05D000001 7.5e-10 69.3 418 23.4


User provided reference genes

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