Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 1.7e-51 205.7 99 100.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 2.0e-44 182.2 105 85.7
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.8e-42 175.6 103 82.5
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 9.1e-42 173.3 104 79.8
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 3.2e-39 164.9 106 75.5
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.2e-38 162.9 101 79.2
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 6.8e-37 157.1 105 73.3
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 4.4e-36 154.5 103 75.7
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 4.9e-35 151.0 102 71.6
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 1.6e-33 146.0 108 70.4
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 1.6e-33 146.0 108 70.4
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 5.9e-33 144.1 101 72.3
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 8.0e-30 133.7 100 69.0
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.3e-29 132.1 100 68.0
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 3.0e-29 131.7 99 74.7
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 5.2e-29 131.0 100 65.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 8.9e-29 130.2 101 64.4
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.2e-28 129.8 99 63.6
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.2e-28 129.8 99 67.7
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 1.5e-28 129.4 119 59.7
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 1.5e-28 129.4 100 69.0
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 2.0e-28 129.0 99 68.7
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 2.0e-28 129.0 107 64.5
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 3.4e-28 128.3 99 62.6
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 4.4e-28 127.9 100 66.0
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 4.4e-28 127.9 101 66.3
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 7.5e-28 127.1 100 67.0
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 7.5e-28 127.1 99 70.7
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 9.8e-28 126.7 103 65.0
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 9.8e-28 126.7 112 61.6
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 9.8e-28 126.7 104 63.5
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 9.8e-28 126.7 102 63.7
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.7e-27 125.9 99 66.7
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.7e-27 125.9 102 65.7
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 2.2e-27 125.6 99 65.7
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 2.2e-27 125.6 99 65.7
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 2.9e-27 125.2 104 63.5
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 3.7e-27 124.8 100 63.0
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 3.7e-27 124.8 100 66.0
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 6.4e-27 124.0 99 64.6
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 6.4e-27 124.0 99 64.6
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 6.4e-27 124.0 99 65.7
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 8.3e-27 123.6 100 67.0
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 1.1e-26 123.2 100 62.0
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.1e-26 123.2 102 61.8
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.4e-26 122.9 99 63.6
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 1.4e-26 122.9 100 66.0
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.4e-26 122.9 96 69.8
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.4e-26 122.9 103 66.0
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 1.8e-26 122.5 100 63.0
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.8e-26 122.5 100 69.0
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.8e-26 122.5 106 64.2
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.8e-26 122.5 99 61.6
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.8e-26 122.5 106 63.2
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 2.4e-26 122.1 100 64.0
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 2.4e-26 122.1 100 64.0
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 2.4e-26 122.1 100 64.0
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.4e-26 122.1 100 65.0
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 3.2e-26 121.7 98 63.3
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 3.2e-26 121.7 100 63.0
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 3.2e-26 121.7 106 62.3
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 3.2e-26 121.7 106 62.3
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 4.1e-26 121.3 99 61.6
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 4.1e-26 121.3 100 63.0
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 4.1e-26 121.3 99 63.6
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 4.1e-26 121.3 99 63.6
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 4.1e-26 121.3 103 60.2
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 4.1e-26 121.3 105 61.9
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 4.1e-26 121.3 100 65.0
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 4.1e-26 121.3 99 60.6
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 5.4e-26 120.9 103 59.2
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 5.4e-26 120.9 100 62.0
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 5.4e-26 120.9 106 62.3
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 7.0e-26 120.6 103 59.2
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 7.0e-26 120.6 103 60.2
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.0e-26 120.6 100 68.0
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.0e-26 120.6 100 68.0
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 7.0e-26 120.6 100 68.0
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 7.0e-26 120.6 100 66.0
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 9.2e-26 120.2 99 61.6
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 1.2e-25 119.8 102 60.8
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.2e-25 119.8 99 62.6
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 2.7e-25 118.6 102 63.7
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.7e-25 118.6 99 68.7
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 3.5e-25 118.2 99 62.6
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 5.9e-25 117.5 108 61.1
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 7.8e-25 117.1 62 85.5
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.0e-24 116.7 104 59.6
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.3e-24 116.3 105 61.9
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.3e-24 116.3 100 63.0
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.7e-24 115.9 108 57.4
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.7e-24 115.9 104 58.7
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 3.9e-24 114.8 102 61.8
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 5.0e-24 114.4 104 59.6
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 6.6e-24 114.0 100 62.0
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.1e-23 113.2 102 59.8
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 1.9e-23 112.5 104 57.7
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.9e-23 112.5 100 60.0
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 2.5e-23 112.1 100 58.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 3.3e-23 111.7 107 57.9
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 3.3e-23 111.7 102 56.9
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 9.5e-23 110.2 88 61.4
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 1.2e-22 109.8 67 77.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.6e-22 109.4 88 67.0
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.6e-22 109.4 107 57.9
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.6e-22 109.4 107 57.9
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.6e-22 109.4 107 57.9
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 2.8e-22 108.6 101 55.4
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 8.0e-22 107.1 101 56.4
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 3.1e-21 105.1 64 76.6
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 2.6e-20 102.1 67 74.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-20 101.7 67 73.1
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 3.4e-20 101.7 101 53.5
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 5.8e-20 100.9 108 54.6
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 5.4e-18 94.4 94 58.5
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.3e-16 89.7 90 51.1
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 3.9e-16 88.2 101 47.5
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 4.3e-15 84.7 63 61.9
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 9.5e-15 83.6 50 66.0
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 4.7e-14 81.3 85 48.2
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 1.4e-13 79.7 96 45.8
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 2.3e-13 79.0 91 42.9
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 3.1e-13 78.6 55 67.3
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 3.4e-12 75.1 65 64.6
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 9.9e-12 73.6 95 49.5
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 2.9e-11 72.0 113 41.6
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 6.0e-09 64.3 71 50.7
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 7.8e-09 63.9 71 49.3
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.7e-08 62.8 32 81.2
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 8.1e-06 53.9 94 37.2


User provided reference genes

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