Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G033700 Glycine max HOM05D015479 ORTHO05D011556 4.4e-45 184.1 85 100.0
Glyma.08G254850 Glycine max HOM05D015479 ORTHO05D011556 1.4e-30 136.0 82 76.8
Glyma.18G277700 Glycine max HOM05D015479 ORTHO05D011556 4.9e-28 127.5 85 70.6
Phvul.008G024900 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 1.6e-23 112.5 81 65.4
Phvul.008G023200 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 1.4e-22 109.4 81 63.0
Phvul.008G023100 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 3.2e-19 98.2 81 56.8
VMungo1383G3363 Vigna mungo HOM05D015479 ORTHO05D011556 2.7e-18 95.1 73 63.0
Phvul.008G023300 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 1.9e-16 89.0 82 53.7
Psat3g170800 Pisum sativum HOM05D018881 ORTHO05D015713 2.2e-12 75.5 87 49.4
Potri.009G162300 Populus trichocarpa HOM05D012769 ORTHO05D011556 2.3e-09 65.5 78 43.6
Medtr6g025800 Medicago truncatula HOM05D024616 ORTHO05D015713 8.8e-09 63.5 92 41.3
Psat3g178520 Pisum sativum HOM05D018881 ORTHO05D015713 8.8e-09 63.5 92 40.2
Medtr7g417710 Medicago truncatula HOM05D018881 ORTHO05D015713 1.1e-08 63.2 86 44.2
Medtr7g417780 Medicago truncatula HOM05D018881 ORTHO05D015713 1.1e-08 63.2 86 44.2
arahy.Tifrunner.gnm1.ann1.N2UHCK Arachis hypogaea HOM05D015479 ORTHO05D011556 2.8e-07 58.5 82 36.6
Gohir.D10G135600 Gossypium hirsutum HOM05D011381 ORTHO05D011556 2.8e-07 58.5 77 41.6
Manes.09G033900 Manihot esculenta HOM05D012769 ORTHO05D011556 2.8e-07 58.5 72 40.3
Gohir.A13G063500 Gossypium hirsutum HOM05D011381 ORTHO05D011556 1.1e-06 56.6 77 39.0
Gohir.D13G058500 Gossypium hirsutum HOM05D011381 ORTHO05D011556 1.1e-06 56.6 77 39.0
Gorai.011G150400 Gossypium raimondii HOM05D011381 ORTHO05D011556 1.1e-06 56.6 77 40.3
Gorai.013G066000 Gossypium raimondii HOM05D011381 ORTHO05D011556 1.1e-06 56.6 72 41.7
Gohir.D13G058400 Gossypium hirsutum HOM05D011381 ORTHO05D011556 3.1e-06 55.1 77 39.0
Gohir.D13G058600 Gossypium hirsutum HOM05D011381 ORTHO05D011556 3.1e-06 55.1 77 39.0
Gohir.D13G058700 Gossypium hirsutum HOM05D011381 ORTHO05D011556 3.1e-06 55.1 77 39.0
Gorai.013G066100 Gossypium raimondii HOM05D011381 ORTHO05D011556 3.1e-06 55.1 77 39.0
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 4.1e-06 54.7 93 36.6
Thhalv10027327m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 4.1e-06 54.7 93 37.6
Gorai.013G065900 Gossypium raimondii HOM05D011381 ORTHO05D011556 4.1e-06 54.7 77 37.7
Gorai.013G065800 Gossypium raimondii HOM05D011381 ORTHO05D011556 5.3e-06 54.3 83 39.8
Thhalv10026975m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 6.9e-06 53.9 93 36.6
Gorai.001G126600 Gossypium raimondii HOM05D011381 ORTHO05D011556 6.9e-06 53.9 82 39.0
Medtr3g045560 Medicago truncatula HOM05D012640 ORTHO05D016235 6.9e-06 53.9 87 36.8
Manes.09G033825 Manihot esculenta HOM05D012769 ORTHO05D010698 9.1e-06 53.5 62 43.5


User provided reference genes

Program Settings