Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.4e-128 462.2 243 100.0
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 4.6e-103 378.3 243 82.3
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 2.4e-99 365.9 243 79.8
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 2.2e-97 359.4 243 78.6
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.7e-95 352.4 243 77.8
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 6.6e-94 347.8 245 76.3
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.9e-93 346.3 252 74.2
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 5.6e-93 344.7 245 75.9
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.1e-92 342.8 244 75.4
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 5.3e-91 338.2 242 72.7
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 3.4e-90 335.5 243 75.3
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.5e-90 335.1 245 74.7
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 6.4e-89 331.3 243 72.0
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.9e-88 329.7 243 72.4
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.2e-88 328.9 245 72.2
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 3.2e-88 328.9 244 72.1
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 5.4e-88 328.2 245 72.2
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.6e-87 326.6 243 68.7
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 3.5e-87 325.5 243 70.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 3.5e-87 325.5 243 71.2
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 7.9e-87 324.3 246 71.1
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 1.8e-86 323.2 243 72.4
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 3.9e-86 322.0 246 71.1
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 5.1e-86 321.6 242 70.7
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 5.1e-86 321.6 244 69.3
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.5e-85 320.1 241 70.1
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.5e-85 320.1 241 70.1
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.5e-85 320.1 217 78.8
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 5.6e-85 318.2 243 70.0
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 7.4e-85 317.8 247 69.2
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 7.4e-85 317.8 235 72.3
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 7.4e-85 317.8 243 70.0
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 9.6e-85 317.4 243 70.8
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.1e-84 316.2 243 70.4
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 8.1e-84 314.3 243 70.0
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 8.1e-84 314.3 243 70.0
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.8e-83 313.2 243 68.3
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.0e-83 312.0 243 70.0
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 5.3e-83 311.6 243 69.1
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.9e-83 311.2 252 67.9
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 9.0e-83 310.8 218 72.5
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 3.4e-82 308.9 213 76.5
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 4.5e-82 308.5 207 78.3
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 5.8e-82 308.1 243 67.5
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 9.9e-82 307.4 213 73.7
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 9.9e-82 307.4 241 67.2
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.3e-81 307.0 243 66.7
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.3e-81 307.0 243 67.9
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 2.9e-81 305.8 213 74.6
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 8.4e-81 304.3 245 66.1
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 4.2e-80 302.0 221 69.7
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 7.1e-80 301.2 213 73.7
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.6e-79 300.1 243 67.1
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 2.1e-79 299.7 213 71.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 3.5e-79 298.9 222 70.7
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 6.0e-79 298.1 233 66.1
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 7.9e-79 297.7 243 66.7
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 7.9e-79 297.7 243 66.7
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.3e-78 297.0 213 70.9
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.3e-78 297.0 243 66.7
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.8e-78 296.6 243 66.7
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.3e-78 296.2 208 73.1
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 3.9e-78 295.4 243 66.3
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 6.7e-78 294.7 245 65.7
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.1e-77 293.9 243 66.3
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 2.5e-77 292.7 213 70.0
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 5.6e-77 291.6 253 64.0
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 5.6e-77 291.6 239 64.4
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 7.4e-77 291.2 240 63.3
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 9.6e-77 290.8 243 65.4
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.6e-76 290.0 244 66.0
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.6e-76 290.0 240 63.3
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.1e-76 289.7 245 64.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.7e-76 288.9 246 63.8
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 6.2e-76 288.1 215 70.2
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 6.2e-76 288.1 215 70.2
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 8.2e-76 287.7 204 74.5
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 4.0e-75 285.4 246 63.0
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 5.3e-75 285.0 252 62.3
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.2e-74 283.9 208 70.7
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.2e-74 283.9 215 69.8
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.5e-74 283.5 244 64.8
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 5.8e-74 281.6 243 63.4
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 5.8e-74 281.6 215 67.9
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.7e-73 280.0 222 68.0
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 6.5e-73 278.1 247 67.2
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 4.6e-71 271.9 240 63.8
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 3.0e-70 269.2 213 62.4
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.8e-68 262.7 213 61.0
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 6.3e-68 261.5 210 65.2
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.1e-67 260.8 234 59.4
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.1e-67 260.8 223 61.9
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.4e-67 259.6 233 61.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 5.5e-64 248.4 193 68.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.1e-61 240.7 243 63.8
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 2.4e-59 233.0 212 58.5
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.3e-59 231.9 175 72.0
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 1.2e-58 230.7 224 54.9
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.9e-57 226.1 213 54.9
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.1e-53 214.2 206 54.4
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 6.7e-46 188.3 227 44.9
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 6.8e-38 161.8 119 68.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 6.8e-38 161.8 221 43.4
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 2.2e-36 156.8 154 56.5
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.5e-34 149.4 99 80.8
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 6.5e-33 145.2 120 66.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.2e-26 124.4 243 37.0
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.1e-23 113.6 79 73.4
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 2.5e-16 90.1 205 32.7
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 1.5e-13 80.9 58 81.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 4.4e-13 79.3 156 32.1
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 5.8e-13 79.0 51 80.4
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 5.6e-08 62.4 52 65.4


User provided reference genes

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