Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 1.3e-134 483.0 242 100.0
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 3.3e-53 212.6 225 56.4
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 5.9e-42 175.3 225 48.0
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 8.5e-41 171.4 224 49.6
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 3.2e-40 169.5 218 48.6
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 3.6e-39 166.0 218 48.2
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 3.6e-39 166.0 228 46.9
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.8e-35 153.7 213 47.9
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.2e-34 151.0 218 45.9
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 7.7e-34 148.3 217 46.1
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.1e-32 144.4 216 42.6
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 4.7e-31 139.0 239 36.8
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 4.0e-30 136.0 231 38.5
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.5e-29 134.0 225 40.9
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-29 134.0 216 42.1
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 2.6e-29 133.3 216 42.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.7e-28 130.6 211 42.2
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 3.7e-28 129.4 247 36.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 3.7e-28 129.4 234 37.6
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.8e-27 127.1 225 36.4
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 3.1e-27 126.3 226 38.5
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 1.2e-26 124.4 225 39.6
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.2e-26 124.4 221 37.1
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 2.7e-26 123.2 228 37.7
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 3.5e-26 122.9 225 37.3
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 3.5e-26 122.9 222 38.3
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 3.5e-26 122.9 235 37.4
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 5.9e-26 122.1 216 37.5
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.0e-25 121.3 221 38.5
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.8e-25 119.4 230 36.5
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 8.5e-25 118.2 219 37.9
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.5e-24 117.5 211 39.3
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.5e-24 117.5 216 38.0
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.9e-24 117.1 216 36.6
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 9.4e-24 114.8 221 35.3
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.2e-23 114.4 193 44.6
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 1.2e-23 114.4 216 39.8
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.6e-23 114.0 221 36.7
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.6e-23 114.0 221 35.7
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.1e-23 113.6 221 34.8
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 2.1e-23 113.6 233 36.1
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.1e-23 113.6 217 38.2
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 2.1e-23 113.6 211 38.4
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 2.7e-23 113.2 217 38.7
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 4.7e-23 112.5 212 34.9
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 6.1e-23 112.1 220 36.4
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 6.1e-23 112.1 221 38.0
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 8.0e-23 111.7 210 35.2
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.8e-22 110.5 211 36.0
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.8e-22 110.5 221 36.2
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 3.0e-22 109.8 215 36.3
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 4.0e-22 109.4 225 35.1
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.0e-22 109.4 221 34.8
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 4.0e-22 109.4 211 38.9
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 5.2e-22 109.0 225 32.4
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 5.2e-22 109.0 221 35.7
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 5.2e-22 109.0 211 37.4
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-21 107.8 221 35.7
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.2e-21 107.8 221 35.3
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 1.5e-21 107.5 219 36.5
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.5e-21 107.5 218 36.2
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 4.4e-21 105.9 234 35.0
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 5.7e-21 105.5 215 34.4
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 7.5e-21 105.1 221 34.8
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 9.8e-21 104.8 222 33.8
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 9.8e-21 104.8 216 35.6
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.3e-20 104.4 215 35.8
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 1.7e-20 104.0 216 35.2
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 2.8e-20 103.2 226 33.2
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 3.7e-20 102.8 232 34.9
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.7e-20 102.8 226 35.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 4.8e-20 102.4 226 35.4
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 4.8e-20 102.4 218 32.1
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 8.3e-20 101.7 213 35.7
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 8.3e-20 101.7 211 34.1
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 8.3e-20 101.7 211 34.1
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 8.3e-20 101.7 227 33.5
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.4e-19 100.9 217 33.6
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.8e-19 100.5 213 32.9
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 2.4e-19 100.1 242 32.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 7.0e-19 98.6 194 37.6
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.6e-18 97.4 227 32.6
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.6e-18 97.4 161 44.1
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.0e-18 97.1 229 32.8
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.0e-18 97.1 226 32.3
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 2.0e-18 97.1 214 35.0
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 2.7e-18 96.7 213 32.4
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 5.9e-18 95.5 217 33.2
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 1.7e-17 94.0 222 32.9
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.1e-16 91.3 221 32.6
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 3.2e-16 89.7 232 31.9
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.6e-15 87.4 216 33.8
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.8e-14 82.0 221 30.3
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 6.8e-14 82.0 170 37.6
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.2e-13 81.3 138 39.1
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.2e-13 81.3 205 32.7
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 4.9e-12 75.9 65 63.1
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 8.3e-12 75.1 226 29.6
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.8e-11 73.9 213 29.6
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 1.8e-11 73.9 236 29.2
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 4.1e-11 72.8 136 36.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.0e-10 70.5 113 36.3
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.8e-06 57.4 44 59.1
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.8e-06 57.4 136 33.8
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.3e-06 57.0 117 32.5
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 3.0e-06 56.6 66 50.0
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 3.0e-06 56.6 50 56.0
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 5.2e-06 55.8 44 63.6


User provided reference genes

Program Settings