Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 3.0e-44 181.4 88 100.0
Glyma.20G115200 Glycine max HOM05D008456 ORTHO05D010229 1.1e-33 146.4 115 69.6
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 1.3e-26 122.9 93 76.3
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 8.2e-18 93.6 73 68.5
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 1.5e-16 89.4 88 63.6
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.0e-15 86.7 90 56.7
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 2.2e-15 85.5 92 57.6
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 1.4e-14 82.8 93 53.8
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 2.7e-13 78.6 90 56.7
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 6.1e-13 77.4 91 53.8
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 1.4e-12 76.3 88 54.5
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 1.8e-12 75.9 91 51.6
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 2.3e-12 75.5 92 53.3
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 8.8e-12 73.6 92 54.3
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 2.5e-11 72.0 90 51.1
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 2.5e-11 72.0 89 49.4
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 4.3e-11 71.2 88 51.1
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 5.7e-11 70.9 93 51.6
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 7.4e-11 70.5 88 51.1
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 7.4e-11 70.5 90 56.7
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.7e-10 69.3 94 50.0
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 2.2e-10 68.9 88 53.4
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 4.8e-10 67.8 37 81.1
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 4.8e-10 67.8 88 50.0
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 6.3e-10 67.4 91 49.5
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 8.2e-10 67.0 94 50.0
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 8.2e-10 67.0 94 50.0
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 1.1e-09 66.6 92 47.8
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 2.4e-09 65.5 78 55.1
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 5.3e-09 64.3 37 75.7
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.0e-08 62.4 88 50.0
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 4.5e-08 61.2 88 50.0
CiPaw.03G230800 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.0e-07 60.1 117 35.9
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.0e-07 60.1 88 48.9
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 1.0e-07 60.1 91 50.5
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 8.5e-07 57.0 83 50.6
Glyma.08G261450 Glycine max HOM05D035241 ORTHO05D035916 2.5e-06 55.5 90 46.7
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 7.2e-06 53.9 90 46.7
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 9.4e-06 53.5 66 47.0
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 9.4e-06 53.5 88 44.3


User provided reference genes

Program Settings