Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 1.2e-77 293.1 154 100.0
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 1.7e-42 176.4 153 70.6
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 2.1e-37 159.5 154 59.1
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 1.4e-36 156.8 153 58.8
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 2.5e-30 136.0 157 47.8
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 5.2e-28 128.3 157 52.2
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 2.9e-26 122.5 144 49.3
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 2.7e-24 115.9 144 46.5
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 3.0e-23 112.5 77 68.8
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 8.1e-21 104.4 68 70.6
Lj5g0000209 Lotus japonicus HOM05D007757 ORTHO05D009619 2.2e-18 96.3 80 60.0
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 4.8e-13 78.6 106 40.6
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 1.1e-12 77.4 73 52.1
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 3.1e-12 75.9 66 51.5
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 3.1e-12 75.9 78 47.4
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 5.3e-12 75.1 62 51.6
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 5.3e-12 75.1 61 52.5
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 6.9e-12 74.7 106 37.7
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 9.0e-12 74.3 65 49.2
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 9.0e-12 74.3 61 54.1
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 9.0e-12 74.3 49 63.3
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 3.4e-11 72.4 61 50.8
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 4.5e-11 72.0 51 60.8
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 5.8e-11 71.6 49 61.2
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 5.8e-11 71.6 49 61.2
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 9.9e-11 70.9 67 47.8
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 1.3e-10 70.5 61 50.8
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 1.7e-10 70.1 61 52.5
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 1.7e-10 70.1 49 59.2
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 2.2e-10 69.7 53 58.5
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 8.4e-10 67.8 48 56.2
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 8.4e-10 67.8 57 47.4
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 1.4e-09 67.0 61 49.2
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 1.9e-09 66.6 55 58.2
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 1.9e-09 66.6 48 60.4
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 1.9e-09 66.6 48 60.4
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 7.1e-09 64.7 61 50.8
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 1.6e-08 63.5 53 49.1
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 1.6e-08 63.5 76 42.1
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 1.6e-08 63.5 76 42.1
Rhsim09G0107900 Rhododendron simsii HOM05D007757 ORTHO05D009619 1.6e-08 63.5 67 47.8
Nn4g23846 Nelumbo nucifera HOM05D021434 ORTHO05D009619 3.5e-08 62.4 73 41.1
Sc11g0003440 Simmondsia chinensis HOM05D007757 ORTHO05D009619 4.6e-08 62.0 57 49.1
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 7.9e-08 61.2 46 50.0
CARHR026040 Cardamine hirsuta HOM05D007757 ORTHO05D009619 1.0e-07 60.8 58 43.1
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 1.0e-07 60.8 51 52.9
Nn3g17018 Nelumbo nucifera HOM05D021434 ORTHO05D009619 1.8e-07 60.1 73 39.7
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 3.0e-07 59.3 43 51.2
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 3.0e-07 59.3 45 53.3
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 3.0e-07 59.3 45 53.3
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 3.0e-07 59.3 45 53.3
RcHm_v2.0_Chr4g0435141 Rosa chinensis HOM05D007757 ORTHO05D009619 3.0e-07 59.3 63 47.6
AT1G25422 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 3.9e-07 58.9 52 48.1
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 3.9e-07 58.9 46 52.2
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 3.9e-07 58.9 46 52.2
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 3.9e-07 58.9 46 52.2
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 3.9e-07 58.9 46 52.2
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 3.9e-07 58.9 43 55.8
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 5.1e-07 58.5 46 52.2
Carub.0001s2507 Capsella rubella HOM05D007757 ORTHO05D009619 5.1e-07 58.5 57 49.1
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 5.1e-07 58.5 41 51.2
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 6.7e-07 58.2 43 51.2
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 6.7e-07 58.2 46 50.0
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 8.7e-07 57.8 43 46.5
FvH4_4g27340 Fragaria vesca HOM05D007757 ORTHO05D009619 1.1e-06 57.4 51 51.0
FAN12G3266 Fragaria x ananassa HOM05D007757 ORTHO05D009619 1.1e-06 57.4 51 51.0
FAN12G3307 Fragaria x ananassa HOM05D007757 ORTHO05D009619 1.1e-06 57.4 51 51.0
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 1.1e-06 57.4 70 44.3
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 1.5e-06 57.0 45 51.1
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 1.5e-06 57.0 45 51.1
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 1.9e-06 56.6 43 48.8
Ciclev10017153m.g Citrus clementina HOM05D007757 ORTHO05D009619 1.9e-06 56.6 62 43.5
FAN07G0332 Fragaria x ananassa HOM05D007757 ORTHO05D009619 1.9e-06 56.6 50 46.0
AL1G39890 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 2.5e-06 56.2 44 52.3
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 2.5e-06 56.2 48 50.0
Nn3g17848 Nelumbo nucifera HOM05D021434 ORTHO05D009619 5.6e-06 55.1 65 38.5


User provided reference genes

Program Settings