Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.5e-138 496.1 245 100.0
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.6e-124 449.5 248 89.9
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 6.0e-119 431.0 235 90.6
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 1.8e-115 419.5 238 84.9
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 4.0e-115 418.3 248 84.3
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 1.8e-107 392.9 245 80.0
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 5.3e-107 391.3 245 80.0
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 7.6e-106 387.5 232 81.9
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 4.6e-103 378.3 246 76.0
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 7.9e-103 377.5 249 76.7
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 7.9e-103 377.5 236 80.1
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.3e-102 376.7 247 74.9
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 2.3e-102 375.9 245 76.3
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 3.0e-102 375.6 248 76.2
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 8.7e-102 374.0 242 76.4
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.5e-101 373.2 247 75.7
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.9e-101 372.9 245 75.5
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.5e-101 372.5 247 74.9
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.5e-101 372.5 242 76.0
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 5.7e-101 371.3 249 75.5
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 5.7e-101 371.3 247 74.9
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.4e-101 370.9 247 74.9
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 7.4e-101 370.9 247 75.3
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 2.1e-100 369.4 246 74.0
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 2.8e-100 369.0 245 75.5
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 6.3e-100 367.9 244 74.6
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 8.2e-100 367.5 242 74.8
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.1e-99 367.1 247 74.1
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.4e-99 366.7 203 90.1
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.3e-99 364.8 247 74.1
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 9.0e-99 364.0 245 75.1
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.5e-98 363.2 251 73.3
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.5e-98 363.2 251 73.3
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 2.0e-98 362.8 208 83.2
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.3e-97 360.1 240 73.3
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.7e-97 359.8 240 75.0
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.5e-97 357.8 237 73.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 1.1e-96 357.1 238 72.3
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 1.4e-96 356.7 247 73.3
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.9e-96 356.3 247 71.7
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 9.3e-96 354.0 238 71.0
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.6e-95 353.2 230 75.2
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 2.1e-95 352.8 246 71.1
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 6.1e-95 351.3 232 74.1
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 6.1e-95 351.3 250 71.2
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 7.9e-95 350.9 245 72.7
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 7.9e-95 350.9 245 72.2
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.8e-94 349.7 250 71.2
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.8e-94 349.7 237 71.3
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 2.3e-94 349.4 241 72.6
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 3.0e-94 349.0 239 71.5
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 3.0e-94 349.0 248 71.8
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 3.9e-94 348.6 242 70.7
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 1.1e-93 347.1 248 69.4
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 5.7e-93 344.7 251 70.1
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.4e-93 344.4 250 70.4
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 9.7e-93 344.0 230 72.6
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.8e-92 342.4 236 70.3
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 3.7e-92 342.0 251 69.7
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.8e-91 339.7 235 71.9
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 5.3e-91 338.2 221 75.1
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 5.3e-91 338.2 307 58.6
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 2.6e-90 335.9 240 69.6
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.9e-90 334.7 226 72.6
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 5.9e-90 334.7 235 70.2
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 5.9e-90 334.7 240 69.2
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 7.7e-90 334.3 239 69.5
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 1.0e-89 334.0 239 69.0
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.0e-89 334.0 232 71.1
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 2.2e-89 332.8 221 73.8
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 2.2e-89 332.8 244 68.9
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 2.2e-89 332.8 240 69.2
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 3.8e-89 332.0 238 69.7
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 8.5e-89 330.9 239 68.2
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 8.5e-89 330.9 241 67.6
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.4e-88 330.1 239 69.0
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.4e-88 330.1 240 69.6
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 1.9e-88 329.7 201 78.6
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 2.5e-88 329.3 238 67.6
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 5.5e-88 328.2 234 69.2
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 7.2e-88 327.8 226 71.7
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 7.2e-88 327.8 221 71.0
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.1e-87 326.2 293 57.7
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.1e-87 326.2 248 68.5
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.6e-87 325.5 249 67.5
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 3.6e-87 325.5 248 68.5
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.6e-87 325.5 235 69.4
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 4.6e-87 325.1 242 69.4
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 4.6e-87 325.1 245 67.3
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 7.9e-87 324.3 249 66.7
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 7.9e-87 324.3 249 66.7
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.5e-85 320.1 231 68.0
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 2.2e-84 316.2 232 67.2
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 2.6e-82 309.3 198 76.3
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 3.4e-82 308.9 198 75.3
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 7.7e-82 307.8 198 75.8
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.4e-80 303.5 240 63.8
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.5e-80 302.8 223 63.2
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 3.2e-80 302.4 234 64.1
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 4.2e-80 302.0 239 63.2
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 2.7e-79 299.3 221 67.0
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 8.8e-78 294.3 227 65.2
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.5e-77 293.5 200 72.0
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 1.7e-73 280.0 195 70.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 7.2e-72 274.6 198 67.2
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 1.8e-67 260.0 199 65.3
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.7e-66 256.1 217 60.8
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.9e-65 252.7 273 55.3
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 6.5e-65 251.5 225 56.0
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 5.5e-64 248.4 141 85.8
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 8.8e-62 241.1 223 52.0
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.8e-60 236.1 147 76.9
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 7.7e-58 228.0 216 56.5
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.9e-56 223.4 243 49.8
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.2e-52 209.9 190 57.9
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 4.9e-52 208.8 196 55.6
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.4e-51 205.3 134 74.6
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 1.5e-32 144.1 187 43.3
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 6.4e-28 128.6 275 33.1
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 2.4e-27 126.7 209 37.3
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.5e-24 117.5 91 62.6
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 8.9e-22 108.2 187 38.5
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 2.2e-20 103.6 205 33.2
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 4.0e-14 82.8 80 53.8
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 5.2e-14 82.4 49 75.5
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.3e-11 71.6 49 63.3
MCO01G267 Micromonas commoda HOM05D049972 ORTHO05D049270 4.6e-10 69.3 218 27.5
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 6.2e-07 58.9 33 72.7
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 1.4e-06 57.8 225 28.0


User provided reference genes

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