Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G237100 Glycine max HOM05D010814 ORTHO05D011500 7.0e-38 160.2 87 100.0
Phvul.007G068800 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 3.4e-24 114.8 89 73.0
TPR.G14345 Trifolium pratense HOM05D010814 ORTHO05D011500 1.2e-21 106.3 88 69.3
arahy.Tifrunner.gnm1.ann1.XE2AGZ Arachis hypogaea HOM05D010814 ORTHO05D011500 2.3e-20 102.1 89 67.4
arahy.Tifrunner.gnm1.ann1.FHW390 Arachis hypogaea HOM05D010814 ORTHO05D011500 3.3e-19 98.2 89 65.2
Glyma.06G221500 Glycine max HOM05D010814 ORTHO05D011500 6.2e-18 94.0 88 63.6
Lj5g0013931 Lotus japonicus HOM05D010814 ORTHO05D011500 8.1e-18 93.6 87 63.2
Glyma.10G237150 Glycine max HOM05D010814 ORTHO05D011500 2.4e-17 92.0 89 66.3
Lalb_Chr02g0140971 Lupinus albus HOM05D010814 ORTHO05D011500 1.5e-16 89.4 87 64.4
Phvul.007G068400 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 8.4e-15 83.6 87 57.5
Medtr1g100733 Medicago truncatula HOM05D010814 ORTHO05D011500 7.1e-14 80.5 89 56.2
Phvul.007G068500 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 2.1e-13 79.0 87 56.3
Phvul.007G068600 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 6.0e-13 77.4 86 50.0
Lalb_Chr03g0034461 Lupinus albus HOM05D010814 ORTHO05D011500 3.9e-12 74.7 87 54.0
arahy.Tifrunner.gnm1.ann1.9UZ7BM Arachis hypogaea HOM05D010814 ORTHO05D011500 9.6e-11 70.1 71 53.5
arahy.Tifrunner.gnm1.ann1.P4H4GE Arachis hypogaea HOM05D010814 ORTHO05D011500 6.2e-10 67.4 50 70.0
CiPaw.04G065300 Carya illinoinensis HOM05D012645 ORTHO05D011500 1.1e-09 66.6 87 46.0
Phvul.007G068700 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 6.9e-09 63.9 86 44.2
Manes.06G146100 Manihot esculenta HOM05D012645 ORTHO05D011500 4.4e-08 61.2 87 46.0
Potri.012G138200 Populus trichocarpa HOM05D010814 ORTHO05D011500 8.4e-07 57.0 86 41.9
Gohir.D08G111100 Gossypium hirsutum HOM05D012645 ORTHO05D011500 1.1e-06 56.6 87 37.9
Gorai.004G119100 Gossypium raimondii HOM05D012645 ORTHO05D011500 1.1e-06 56.6 87 37.9
Potri.015G139966 Populus trichocarpa HOM05D010814 ORTHO05D011500 2.4e-06 55.5 84 40.5
Manes.14G027000 Manihot esculenta HOM05D012645 ORTHO05D011500 3.2e-06 55.1 90 40.0


User provided reference genes

Program Settings