Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 1.4e-295 1018.8 497 100.0
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 4.0e-279 964.1 497 94.2
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 3.3e-257 891.3 504 86.1
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 4.0e-247 857.8 495 83.8
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 6.5e-245 850.5 496 83.3
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 7.1e-244 847.0 496 82.5
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 6.7e-242 840.5 498 82.5
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 8.7e-242 840.1 492 82.9
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 3.4e-230 801.6 478 81.0
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 4.5e-230 801.2 450 84.0
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 5.7e-225 784.3 436 86.5
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 2.8e-224 781.9 502 75.7
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 2.0e-222 775.8 466 78.5
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 2.3e-202 709.1 456 73.0
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 4.1e-199 698.4 491 67.8
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 1.0e-197 693.7 489 67.5
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 1.3e-192 676.8 426 73.9
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 5.4e-191 671.4 489 65.4
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 7.0e-191 671.0 489 66.5
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 1.6e-190 669.8 495 66.5
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 2.7e-190 669.1 464 67.5
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 3.5e-190 668.7 500 65.2
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 1.7e-189 666.4 492 64.6
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 2.3e-189 666.0 495 65.7
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 1.5e-188 663.3 429 69.9
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 2.5e-188 662.5 493 65.3
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 4.3e-188 661.8 496 65.7
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 4.3e-188 661.8 509 64.4
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 3.0e-186 655.6 535 59.3
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.2e-185 653.7 435 69.4
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 2.6e-185 652.5 484 64.7
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 7.5e-185 651.0 486 66.7
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 2.9e-184 649.0 492 62.6
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 6.4e-184 647.9 498 63.3
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 4.1e-183 645.2 492 63.0
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 1.6e-182 643.3 481 65.3
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 2.7e-182 642.5 539 60.5
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 8.6e-181 637.5 496 62.1
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 5.6e-180 634.8 490 62.7
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 2.8e-179 632.5 488 61.9
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 6.2e-179 631.3 479 62.0
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 6.2e-179 631.3 490 62.7
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 6.2e-179 631.3 498 62.7
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 8.0e-179 630.9 501 62.1
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.0e-178 630.6 495 62.6
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 4.0e-178 628.6 491 61.5
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 6.8e-178 627.9 449 65.7
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 8.9e-178 627.5 499 62.9
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 4.4e-177 625.2 498 62.2
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 5.8e-177 624.8 495 62.0
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 5.8e-177 624.8 472 63.1
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 1.3e-176 623.6 495 62.2
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 2.9e-176 622.5 499 60.7
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 2.9e-176 622.5 492 61.6
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 6.4e-176 621.3 418 70.1
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 1.4e-175 620.2 485 61.9
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 7.0e-175 617.8 497 60.4
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 6.0e-174 614.8 485 61.4
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 1.0e-173 614.0 450 66.0
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 1.7e-173 613.2 488 61.1
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 1.7e-173 613.2 429 66.4
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.5e-172 610.1 516 59.7
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 1.6e-171 606.7 452 62.4
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 4.7e-171 605.1 504 59.3
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 1.4e-170 603.6 489 60.5
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 6.8e-170 601.3 490 61.8
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 6.8e-170 601.3 483 61.1
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 2.9e-168 595.9 405 68.1
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 3.7e-168 595.5 501 58.5
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 4.1e-167 592.0 389 69.4
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 9.2e-167 590.9 411 67.2
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 1.7e-165 586.6 447 63.3
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 3.3e-164 582.4 500 58.8
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 9.5e-164 580.9 416 63.9
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 3.6e-163 578.9 485 59.2
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 3.6e-163 578.9 459 60.1
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 6.2e-163 578.2 519 57.2
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 3.1e-162 575.9 494 57.9
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 8.4e-160 567.8 466 58.8
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 2.3e-157 559.7 415 64.3
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 6.6e-157 558.1 375 69.1
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 1.5e-156 557.0 480 57.7
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 1.2e-155 553.9 496 58.7
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 4.7e-155 552.0 449 61.9
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 1.5e-153 547.0 422 60.7
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 4.2e-151 538.9 519 54.7
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 6.0e-150 535.0 403 65.0
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 3.8e-144 515.8 396 63.1
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 4.5e-137 492.3 353 67.1
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 1.1e-135 487.6 467 53.7
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 1.4e-135 487.3 305 72.1
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 9.3e-135 484.6 329 68.1
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 9.3e-135 484.6 360 65.6
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.1e-132 477.6 550 49.3
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 2.1e-131 473.4 365 60.5
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 2.1e-126 456.8 357 59.7
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 1.8e-125 453.8 367 56.9
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 8.5e-120 434.9 383 58.2
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 3.2e-119 433.0 349 61.0
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 9.3e-119 431.4 355 56.3
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 5.0e-112 409.1 279 71.0
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 8.8e-101 371.7 250 69.6
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 8.8e-101 371.7 250 69.6
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 3.2e-95 353.2 248 68.5
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 1.6e-94 350.9 248 68.1
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 1.2e-92 344.7 338 49.4
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 9.7e-92 341.7 397 44.8
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.7e-88 330.9 330 50.3
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 4.2e-87 326.2 290 56.9
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 2.0e-84 317.4 240 65.0
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 4.4e-84 316.2 237 65.4
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 1.0e-80 305.1 174 77.6
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 8.9e-69 265.4 401 37.2
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 8.3e-67 258.8 232 54.7
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 1.1e-66 258.5 239 53.6
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 8.6e-64 248.8 318 41.8
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 2.2e-59 234.2 156 71.2
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 6.4e-59 232.6 186 63.4
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 2.2e-51 207.6 234 48.7
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 1.1e-42 178.7 106 77.4
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 8.1e-38 162.5 92 76.1
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 4.4e-36 156.8 305 34.8
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 8.7e-32 142.5 92 70.7
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 3.1e-29 134.0 340 30.0
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 4.0e-29 133.7 76 76.3
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 1.6e-25 121.7 125 49.6
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 3.4e-20 104.0 55 76.4
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 8.4e-19 99.4 362 25.4
Prupe.8G040900 Prunus persica HOM05D005921 ORTHO05D007374 2.6e-12 77.8 102 45.1
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 3.8e-11 73.9 102 42.2
CBR_g24397 Chara braunii HOM05D005921 ORTHO05D132278 4.8e-06 57.0 84 28.6


User provided reference genes

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