Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 1.9e-161 572.4 279 100.0
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 1.6e-155 552.7 279 97.1
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.0e-146 523.5 273 90.5
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 2.8e-136 488.8 278 84.2
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 4.7e-136 488.0 280 85.7
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 8.1e-136 487.3 280 85.4
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 2.0e-134 482.6 286 83.6
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 4.4e-134 481.5 286 83.2
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 6.8e-127 457.6 281 80.8
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 2.1e-120 436.0 279 77.4
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 8.1e-120 434.1 280 75.0
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 1.4e-119 433.3 286 75.2
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 4.0e-119 431.8 289 73.4
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 5.2e-119 431.4 271 76.4
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 5.2e-119 431.4 295 72.5
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 5.2e-119 431.4 292 74.3
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 8.9e-119 430.6 289 73.7
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 8.9e-119 430.6 289 73.0
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.0e-118 429.5 287 73.9
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 5.8e-118 427.9 225 90.7
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 7.6e-118 427.6 286 73.1
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 1.3e-117 426.8 280 75.7
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.9e-117 425.6 289 72.7
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.9e-117 425.6 244 85.2
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 3.8e-117 425.2 290 73.8
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 4.9e-117 424.9 288 74.0
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.4e-116 423.3 256 81.6
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.9e-116 422.9 293 71.7
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 2.4e-116 422.5 282 73.0
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 2.4e-116 422.5 293 71.0
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.7e-115 419.1 285 73.0
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 3.5e-115 418.7 275 75.3
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 3.0e-114 415.6 282 72.3
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 3.0e-114 415.6 291 71.5
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 5.1e-114 414.8 280 71.1
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.9e-113 412.9 273 73.6
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.6e-112 408.7 229 81.2
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 3.4e-110 402.1 284 72.5
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 3.4e-110 402.1 223 82.1
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 9.9e-110 400.6 273 71.4
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 4.9e-109 398.3 284 69.7
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 4.9e-109 398.3 271 71.6
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.2e-108 395.6 226 81.0
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 5.4e-108 394.8 277 70.8
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 5.4e-108 394.8 285 69.8
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 9.3e-108 394.0 274 70.1
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 2.1e-107 392.9 289 67.5
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 2.7e-107 392.5 229 78.6
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.7e-107 392.5 282 67.7
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 4.6e-107 391.7 249 74.3
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 6.0e-107 391.3 291 67.0
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.8e-106 389.8 227 79.7
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 5.1e-106 388.3 286 69.2
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 6.7e-106 387.9 240 75.4
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 6.7e-106 387.9 287 67.2
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 1.1e-105 387.1 279 68.1
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 1.9e-105 386.3 251 73.3
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 3.3e-105 385.6 288 66.7
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 4.3e-105 385.2 286 67.1
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 4.3e-105 385.2 294 66.7
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 5.6e-105 384.8 281 68.7
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 9.6e-105 384.0 231 76.2
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 1.3e-104 383.6 295 66.4
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.6e-104 383.3 274 69.3
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.8e-104 382.5 278 67.6
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 8.1e-104 380.9 225 78.2
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.1e-103 380.6 278 66.9
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 1.4e-103 380.2 288 65.3
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 1.8e-103 379.8 251 71.7
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.4e-103 379.4 284 68.3
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 3.1e-103 379.0 228 80.3
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 9.0e-103 377.5 283 66.8
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 9.0e-103 377.5 287 65.5
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.5e-102 376.7 280 66.1
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 2.0e-102 376.3 286 66.1
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 3.4e-102 375.6 286 66.1
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.5e-102 375.2 283 66.1
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 4.5e-102 375.2 222 77.0
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 9.9e-102 374.0 228 75.9
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 1.3e-101 373.6 284 66.9
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 1.7e-101 373.2 277 65.7
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 2.9e-101 372.5 231 75.3
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 3.8e-101 372.1 286 65.7
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 3.8e-101 372.1 239 71.5
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 4.9e-101 371.7 287 65.5
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 6.4e-101 371.3 292 65.1
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 8.4e-101 370.9 275 65.8
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.4e-100 369.4 278 67.6
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 2.4e-100 369.4 242 73.1
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 3.2e-100 369.0 285 67.7
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 2.7e-99 365.9 287 65.2
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.1e-95 354.0 310 60.6
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.8e-95 353.2 241 68.9
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 2.4e-95 352.8 281 64.4
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 1.0e-93 347.4 231 72.7
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 1.4e-92 343.6 286 61.9
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 6.0e-91 338.2 277 62.8
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 1.0e-90 337.4 240 70.8
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.3e-90 336.3 277 62.5
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 9.6e-89 330.9 208 74.5
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 2.1e-88 329.7 231 65.8
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 2.4e-87 326.2 234 66.7
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.5e-86 323.6 278 55.4
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 2.1e-83 313.2 224 66.5
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.1e-83 313.2 240 63.8
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 3.6e-83 312.4 277 58.5
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 9.7e-81 304.3 178 80.3
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 6.3e-80 301.6 223 60.5
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 3.1e-79 299.3 276 56.5
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 4.1e-79 298.9 232 67.2
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.6e-78 296.2 169 79.3
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.9e-76 290.0 178 75.8
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.1e-73 280.8 167 78.4
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 2.2e-72 276.6 225 59.6
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 4.1e-71 272.3 214 60.7
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.2e-69 266.5 165 73.9
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 1.8e-63 246.9 164 68.9
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 6.7e-58 228.4 157 66.9
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 9.7e-57 224.6 191 63.9
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 2.8e-56 223.0 136 74.3
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 4.8e-56 222.2 131 77.9
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 3.8e-53 212.6 190 62.1
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 1.1e-52 211.1 242 54.1
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 9.4e-52 208.0 150 66.0
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 1.0e-50 204.5 237 43.9
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 1.5e-49 200.7 156 63.5
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 5.5e-44 182.2 205 47.8
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 8.8e-42 174.9 133 60.9
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 4.9e-32 142.5 91 72.5
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 3.5e-30 136.3 131 56.5
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 4.1e-23 112.8 90 57.8
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 7.8e-22 108.6 133 48.1
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.3e-20 102.1 127 44.1
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 8.1e-19 98.6 80 62.5
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 1.4e-15 87.8 247 29.1
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 1.0e-13 81.6 114 39.5
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 2.8e-11 73.6 77 50.6
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.8e-08 63.2 46 65.2
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 6.4e-08 62.4 87 34.5


User provided reference genes

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