Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 2.0e-62 242.3 122 100.0
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 2.1e-56 222.2 122 89.3
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 2.3e-55 218.8 122 87.7
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 2.0e-54 215.7 122 87.7
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.1e-43 179.1 101 84.2
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.7e-43 178.7 115 77.4
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 3.5e-43 178.3 119 73.1
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 4.6e-43 177.9 103 81.6
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 4.6e-43 177.9 105 77.1
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 4.6e-43 177.9 105 77.1
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.0e-42 176.8 123 72.4
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 1.7e-42 176.0 103 80.6
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.7e-42 176.0 115 76.5
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.7e-42 176.0 115 76.5
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.7e-42 176.0 111 76.6
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.3e-42 175.6 100 83.0
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.0e-42 175.3 101 79.2
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 3.0e-42 175.3 118 70.3
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 3.9e-42 174.9 112 75.0
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 3.9e-42 174.9 115 75.7
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 3.9e-42 174.9 104 76.9
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 5.1e-42 174.5 112 75.0
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 5.1e-42 174.5 103 79.6
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 5.1e-42 174.5 98 82.7
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 6.6e-42 174.1 112 77.7
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 6.6e-42 174.1 115 73.0
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 8.6e-42 173.7 113 77.0
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 8.6e-42 173.7 106 78.3
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 8.6e-42 173.7 106 78.3
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 8.6e-42 173.7 106 78.3
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 8.6e-42 173.7 106 78.3
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 1.1e-41 173.3 103 77.7
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.1e-41 173.3 114 73.7
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.1e-41 173.3 103 76.7
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.1e-41 173.3 125 66.4
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.5e-41 172.9 100 82.0
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 1.5e-41 172.9 104 78.8
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.5e-41 172.9 119 72.3
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.5e-41 172.9 98 84.7
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.5e-41 172.9 104 75.0
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.5e-41 172.9 99 80.8
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 1.9e-41 172.6 100 79.0
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 2.5e-41 172.2 103 78.6
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 2.5e-41 172.2 112 76.8
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 3.3e-41 171.8 100 82.0
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.3e-41 171.8 114 72.8
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 3.3e-41 171.8 104 76.0
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.3e-41 171.8 99 80.8
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 4.3e-41 171.4 119 71.4
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 5.6e-41 171.0 114 71.1
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 5.6e-41 171.0 112 74.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 7.3e-41 170.6 100 78.0
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 9.5e-41 170.2 123 65.9
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 9.5e-41 170.2 120 67.5
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 9.5e-41 170.2 101 78.2
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 1.6e-40 169.5 99 81.8
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.6e-40 169.5 114 71.9
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.6e-40 169.5 114 71.9
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.6e-40 169.5 117 67.5
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.8e-40 168.7 120 66.7
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 3.6e-40 168.3 100 76.0
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.6e-40 168.3 100 77.0
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 3.6e-40 168.3 99 79.8
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 3.6e-40 168.3 123 66.7
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 3.6e-40 168.3 111 72.1
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 4.7e-40 167.9 100 78.0
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.1e-39 166.8 99 79.8
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.4e-39 166.4 99 77.8
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 3.1e-39 165.2 109 70.6
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 4.0e-39 164.9 113 70.8
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 4.0e-39 164.9 112 70.5
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 5.2e-39 164.5 122 67.2
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 6.8e-39 164.1 113 68.1
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.2e-38 163.3 101 75.2
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.5e-38 162.9 118 67.8
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 2.0e-38 162.5 108 72.2
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.0e-38 162.5 99 75.8
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 2.6e-38 162.2 118 65.3
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 3.4e-38 161.8 99 75.8
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 7.6e-38 160.6 99 75.8
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 9.9e-38 160.2 96 77.1
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.2e-37 159.1 114 69.3
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 2.2e-37 159.1 126 65.1
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.9e-37 158.7 105 71.4
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 2.9e-37 158.7 103 71.8
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 2.9e-37 158.7 123 61.0
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 8.3e-37 157.1 112 67.9
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 4.1e-36 154.8 100 71.0
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 4.1e-36 154.8 113 69.0
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 4.1e-36 154.8 108 70.4
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 5.4e-36 154.5 94 75.5
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 5.4e-36 154.5 99 71.7
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 9.2e-36 153.7 100 69.0
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 3.5e-35 151.8 117 61.5
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 6.0e-35 151.0 93 75.3
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 3.9e-34 148.3 126 59.5
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 6.6e-34 147.5 125 60.0
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.5e-33 146.4 99 69.7
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 2.5e-33 145.6 188 46.8
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 4.3e-33 144.8 152 52.0
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.6e-32 142.9 139 52.5
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 4.7e-32 141.4 99 72.7
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 6.8e-31 137.5 82 81.7
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 2.6e-30 135.6 78 80.8
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.6e-30 135.6 100 69.0
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 7.6e-30 134.0 98 67.3
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 7.8e-27 124.0 119 55.5
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 1.0e-26 123.6 87 67.8
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 5.1e-26 121.3 68 85.3
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.1e-25 120.2 101 55.4
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.1e-24 115.9 82 69.5
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 8.1e-24 114.0 64 82.8
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.4e-23 113.2 66 78.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.7e-21 106.3 62 79.0
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.4e-20 103.2 63 73.0
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 7.1e-20 100.9 82 62.2
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.1e-17 93.6 106 44.3
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.8e-16 89.0 90 42.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 4.8e-16 88.2 64 65.6
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 1.4e-15 86.7 102 43.1
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.4e-15 85.9 57 73.7
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 3.1e-15 85.5 75 54.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.0e-14 82.8 92 48.9
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 5.8e-14 81.3 90 38.9
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.1e-08 62.8 34 76.5
Medtr1g094845 Medicago truncatula HOM05D006193 ORTHO05D007808 9.0e-07 57.4 51 62.7
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 5.8e-06 54.7 74 43.2


User provided reference genes

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