Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 3.7e-73 278.1 140 100.0
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 3.2e-56 221.9 143 81.8
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 2.0e-34 149.4 137 58.4
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 2.6e-34 149.1 136 60.3
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 2.3e-22 109.4 139 47.5
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 1.5e-21 106.7 132 49.2
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 1.5e-21 106.7 132 49.2
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 1.8e-19 99.8 148 45.3
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 3.4e-18 95.5 131 45.0
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 1.1e-16 90.5 150 39.3
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 1.4e-16 90.1 119 44.5
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 9.3e-16 87.4 105 45.7
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 4.6e-15 85.1 151 37.7
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 2.3e-14 82.8 126 46.8
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 1.1e-13 80.5 109 49.5
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 5.7e-13 78.2 117 41.9
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.6e-12 76.6 127 37.8
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 2.1e-12 76.3 122 38.5
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 3.7e-12 75.5 131 36.6
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 4.8e-12 75.1 110 37.3
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.1e-11 73.9 135 35.6
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 5.3e-11 71.6 134 32.1
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 6.9e-11 71.2 141 33.3
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 9.0e-11 70.9 141 38.3
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.2e-10 70.5 140 32.9
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 1.5e-10 70.1 138 36.2
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 1.5e-10 70.1 138 33.3
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.5e-10 70.1 117 36.8
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.0e-10 69.7 134 31.3
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.6e-10 69.3 134 31.3
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 2.6e-10 69.3 107 39.3
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 3.4e-10 68.9 103 36.9
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 3.4e-10 68.9 125 34.4
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 3.4e-10 68.9 127 33.9
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 3.4e-10 68.9 113 39.8
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 4.5e-10 68.6 123 33.3
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 4.5e-10 68.6 120 34.2
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 5.9e-10 68.2 115 36.5
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 1.0e-09 67.4 139 30.9
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 1.3e-09 67.0 139 34.5
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 1.7e-09 66.6 123 39.8
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 1.7e-09 66.6 119 42.9
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 2.2e-09 66.2 144 30.6
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 3.8e-09 65.5 128 34.4
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 5.0e-09 65.1 150 32.0
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 6.5e-09 64.7 102 36.3
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 6.5e-09 64.7 102 36.3
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 8.5e-09 64.3 119 34.5
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 1.4e-08 63.5 145 29.7
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.4e-08 63.5 128 30.5
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 2.5e-08 62.8 137 31.4
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 2.5e-08 62.8 94 39.4
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 5.5e-08 61.6 86 40.7
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 7.2e-08 61.2 140 33.6
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 1.2e-07 60.5 133 33.1
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 1.2e-07 60.5 94 38.3
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.2e-07 60.5 94 38.3
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 1.6e-07 60.1 120 35.0
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 1.6e-07 60.1 119 33.6
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 2.1e-07 59.7 113 34.5
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 2.1e-07 59.7 112 37.5
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 3.6e-07 58.9 122 30.3
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 4.6e-07 58.5 93 37.6
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 4.6e-07 58.5 102 34.3
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 4.6e-07 58.5 122 34.4
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 4.6e-07 58.5 116 32.8
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 1.0e-06 57.4 88 36.4
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.3e-06 57.0 111 36.9
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 1.3e-06 57.0 121 34.7
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 2.3e-06 56.2 105 34.3
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 3.9e-06 55.5 105 33.3
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 3.9e-06 55.5 85 37.6
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 5.1e-06 55.1 112 38.4
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 8.7e-06 54.3 112 35.7


User provided reference genes

Program Settings