Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 3.0e-81 305.1 146 100.0
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 9.0e-54 213.8 107 93.5
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 2.9e-52 208.8 107 89.7
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.6e-50 203.0 107 87.9
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 2.7e-50 202.2 107 86.9
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.7e-50 202.2 107 89.7
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.7e-50 202.2 107 89.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 6.0e-50 201.1 107 86.0
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 2.3e-49 199.1 107 84.1
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 5.1e-49 198.0 107 84.1
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 5.1e-49 198.0 107 84.1
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.6e-47 193.0 107 81.3
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 4.8e-47 191.4 107 80.4
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 8.2e-47 190.7 107 81.3
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.1e-46 190.3 107 80.4
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.1e-46 190.3 107 80.4
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.4e-46 189.9 107 80.4
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 4.0e-46 188.3 107 80.4
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 6.9e-46 187.6 107 80.4
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.5e-45 186.4 107 77.6
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 3.4e-45 185.3 107 79.4
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.5e-45 184.9 107 76.6
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 4.5e-45 184.9 107 78.5
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 5.8e-45 184.5 107 78.5
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.0e-44 183.7 110 76.4
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.3e-44 183.3 107 74.8
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.9e-44 182.2 107 74.8
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 2.9e-44 182.2 143 60.8
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 3.8e-44 181.8 107 78.5
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 3.8e-44 181.8 107 74.8
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 6.5e-44 181.0 107 75.7
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 6.5e-44 181.0 107 75.7
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 6.5e-44 181.0 107 77.6
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.4e-43 179.9 107 73.8
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.9e-43 179.5 110 73.6
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.5e-43 179.1 107 73.8
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 3.2e-43 178.7 108 74.1
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 4.2e-43 178.3 106 76.4
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 9.3e-43 177.2 107 74.8
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.2e-42 176.8 110 74.5
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.6e-42 176.4 110 74.5
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 2.7e-42 175.6 107 73.8
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.7e-42 175.6 107 73.8
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 2.7e-42 175.6 107 73.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 6.0e-42 174.5 110 73.6
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 6.0e-42 174.5 110 74.5
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 6.0e-42 174.5 110 70.9
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 6.0e-42 174.5 107 74.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 7.9e-42 174.1 110 72.7
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 7.9e-42 174.1 110 72.7
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 2.3e-41 172.6 107 71.0
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 3.0e-41 172.2 107 72.9
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.9e-41 171.8 107 72.0
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.1e-41 171.4 140 58.6
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 5.1e-41 171.4 107 73.8
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 5.1e-41 171.4 108 70.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 6.7e-41 171.0 107 72.0
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 8.7e-41 170.6 111 73.9
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 8.7e-41 170.6 107 71.0
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.5e-40 169.9 107 71.0
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.5e-40 169.9 110 72.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.9e-40 169.5 108 69.4
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.9e-40 169.5 107 72.0
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.9e-40 169.5 107 68.2
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.5e-40 169.1 109 68.8
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 2.5e-40 169.1 107 69.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 5.7e-40 167.9 107 68.2
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 7.4e-40 167.5 110 70.9
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 7.4e-40 167.5 107 72.0
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.3e-39 166.8 107 71.0
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.6e-39 166.4 107 70.1
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.6e-39 166.4 107 71.0
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 3.7e-39 165.2 107 68.2
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 4.8e-39 164.9 107 67.3
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 8.2e-39 164.1 107 72.0
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 8.2e-39 164.1 107 72.0
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.1e-38 163.7 107 68.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.1e-38 163.7 107 67.3
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.1e-38 163.7 107 67.3
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 1.4e-38 163.3 101 72.3
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.8e-38 162.9 117 65.8
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.4e-38 162.5 107 73.8
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 6.9e-38 161.0 107 68.2
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 9.0e-38 160.6 107 67.3
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.5e-37 159.8 114 66.7
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.0e-36 154.8 129 62.0
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 6.5e-36 154.5 110 65.5
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 6.5e-36 154.5 107 65.4
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.4e-35 153.3 130 60.8
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.9e-35 152.9 114 64.0
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.2e-35 152.1 115 67.0
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 9.4e-35 150.6 107 61.7
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.0e-33 147.1 110 61.8
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 3.9e-33 145.2 107 63.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.9e-32 142.9 79 81.0
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 4.8e-31 138.3 142 48.6
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 4.1e-30 135.2 110 57.3
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.3e-28 130.2 75 77.3
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.0e-28 128.3 116 56.9
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 3.0e-25 119.0 66 78.8
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.3e-23 113.6 66 74.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.3e-20 103.6 66 71.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.9e-19 99.8 130 43.1
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 2.0e-16 89.7 117 45.3
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.9e-11 73.2 45 68.9
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 2.1e-10 69.7 42 69.0
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.4e-06 56.2 107 36.4
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.4e-06 56.2 107 36.4
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 5.3e-06 55.1 28 78.6


User provided reference genes

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