Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.3e-262 909.1 423 100.0
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 9.3e-253 876.3 459 90.2
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 4.1e-248 860.9 459 88.2
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.0e-246 856.3 459 88.0
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.4e-240 835.9 459 85.0
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.1e-240 834.3 459 86.1
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 6.9e-240 833.6 459 84.5
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 4.5e-239 830.9 423 88.9
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 5.9e-239 830.5 459 85.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 6.1e-236 820.5 458 83.6
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.8e-235 818.9 475 80.6
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 8.8e-235 816.6 459 83.9
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.0e-234 815.5 458 83.2
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 4.4e-234 814.3 459 82.8
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 7.4e-234 813.5 461 83.1
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.3e-233 812.8 459 82.8
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.2e-233 812.0 459 82.4
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.3e-233 810.4 458 82.8
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.8e-232 808.9 458 82.5
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.1e-232 808.1 460 82.4
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 3.1e-232 808.1 459 80.6
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 4.1e-232 807.7 458 82.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 3.5e-231 804.7 459 81.7
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.7e-230 802.4 455 81.1
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.7e-230 802.4 455 80.9
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 8.5e-230 800.0 460 81.5
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.1e-229 799.7 459 81.3
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.5e-229 799.3 460 81.3
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.9e-229 798.9 460 80.9
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.9e-229 798.9 460 81.3
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.5e-229 798.5 461 81.3
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.5e-229 798.5 461 81.1
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 5.5e-229 797.3 459 80.0
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.1e-228 795.4 459 81.3
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.7e-228 795.0 461 81.3
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.6e-228 794.7 461 80.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.4e-227 792.7 459 81.0
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 8.8e-227 790.0 460 79.6
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.6e-226 788.5 460 80.4
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.6e-226 788.5 460 80.4
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 9.7e-226 786.6 460 80.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.7e-225 784.6 461 79.8
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 5.3e-224 780.8 481 76.9
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.7e-223 778.5 460 78.9
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.3e-222 776.2 460 77.6
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-221 773.1 459 77.6
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.9e-221 772.3 459 77.3
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 3.2e-221 771.5 459 79.5
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 4.2e-221 771.2 459 77.1
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 4.2e-221 771.2 459 77.1
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.6e-220 769.2 460 77.8
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 3.6e-220 768.1 460 76.7
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 8.8e-219 763.5 461 77.4
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.6e-218 761.9 497 74.6
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.3e-217 759.6 460 75.9
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.8e-217 758.4 460 76.1
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.1e-216 756.5 460 76.1
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 9.1e-216 753.4 461 76.4
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 9.1e-216 753.4 459 77.8
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.6e-215 752.7 455 76.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 3.5e-215 751.5 458 76.0
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 5.9e-215 750.7 460 77.0
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.7e-214 749.2 459 75.4
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 6.5e-214 747.3 459 75.2
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 6.5e-214 747.3 459 75.4
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 6.5e-214 747.3 459 75.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 8.6e-214 746.9 462 74.5
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 8.0e-212 740.3 459 74.5
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 8.8e-211 736.9 443 76.7
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 2.6e-210 735.3 459 74.5
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 2.6e-210 735.3 460 73.9
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 3.4e-210 734.9 460 74.1
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 8.3e-209 730.3 486 70.6
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.1e-208 729.9 460 74.8
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.6e-207 726.1 460 74.6
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.0e-207 725.7 459 75.6
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.9e-205 719.2 458 72.5
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.5e-202 709.5 459 71.0
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 2.7e-199 698.7 458 69.9
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.0e-198 696.8 460 72.8
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.9e-197 692.6 464 69.0
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.2e-196 687.6 459 69.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.4e-187 659.8 496 64.3
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.8e-179 632.9 458 67.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 4.0e-179 631.7 459 65.6
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.6e-175 618.2 444 62.4
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.7e-174 616.3 443 62.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 2.5e-173 612.5 393 72.0
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.6e-172 608.6 300 94.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.6e-172 608.6 300 94.0
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 7.6e-170 600.9 454 60.8
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 7.1e-168 594.3 300 90.3
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.1e-167 592.8 456 59.0
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 3.5e-167 592.0 299 91.0
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.5e-167 592.0 300 90.0
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 8.7e-166 587.4 300 89.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-165 587.0 300 89.3
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.3e-165 585.1 300 89.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.5e-162 576.6 300 88.7
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 3.4e-162 575.5 465 57.6
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.3e-156 557.0 297 85.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.2e-153 546.2 304 83.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.7e-151 539.3 301 81.7
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 7.9e-151 537.7 297 82.2
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 9.6e-149 530.8 451 52.8
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 6.9e-147 524.6 297 81.8
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 2.2e-140 503.1 277 80.5
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 3.3e-133 479.2 297 75.1
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 6.3e-132 474.9 251 85.7
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-129 465.7 289 77.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.0e-125 453.4 300 65.7
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 6.5e-113 411.8 225 82.2
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.1e-99 366.3 449 39.2
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 5.7e-93 345.5 484 36.8
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-57 227.3 110 92.7
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-57 227.3 110 92.7
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.1e-57 226.1 110 91.8
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 6.6e-57 225.7 122 81.1
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.0e-53 214.2 163 61.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.1e-42 177.6 100 82.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 5.5e-11 73.2 40 77.5


User provided reference genes

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