Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 0.0e+00 1191.0 608 100.0
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 2.4e-262 908.7 592 81.2
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 4.6e-229 798.1 582 72.9
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 7.7e-216 754.2 590 70.5
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 1.2e-203 713.8 594 64.3
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 3.2e-198 695.7 594 63.5
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 1.1e-190 670.6 567 64.2
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 2.3e-188 662.9 590 62.7
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.7e-184 649.4 581 61.8
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 1.6e-181 640.2 590 61.9
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 9.0e-148 528.1 616 51.8
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 2.1e-112 410.6 588 43.0
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 2.2e-109 400.6 424 54.2
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 1.2e-107 394.8 425 54.1
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 7.7e-107 392.1 606 41.1
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 1.1e-105 388.3 425 53.4
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 6.1e-104 382.5 589 41.6
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 1.4e-100 371.3 588 41.0
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 5.9e-99 365.9 603 38.8
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 2.2e-98 364.0 618 39.0
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 4.7e-96 356.3 587 40.0
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 4.0e-95 353.2 587 38.3
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 2.0e-94 350.9 583 38.6
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 9.7e-94 348.6 604 36.4
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 2.2e-93 347.4 572 39.9
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.7e-93 346.7 604 36.4
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 1.8e-92 344.4 601 39.6
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.8e-92 344.4 603 36.5
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 2.4e-92 344.0 596 36.6
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 3.1e-92 343.6 591 38.6
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.3e-92 342.8 591 38.6
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.0e-90 336.3 591 38.4
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 8.5e-90 335.5 590 36.9
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.5e-89 334.7 591 38.2
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.9e-89 334.3 591 37.9
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 7.2e-89 332.4 597 38.2
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 2.7e-88 330.5 593 37.6
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 3.6e-88 330.1 590 38.1
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.7e-85 321.2 590 38.3
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 4.8e-85 319.7 584 37.8
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 4.8e-85 319.7 607 37.1
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 8.3e-85 318.9 439 44.9
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 2.7e-83 313.9 596 38.3
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 1.3e-82 311.6 589 37.5
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 2.9e-82 310.5 575 37.2
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 5.2e-79 299.7 584 35.3
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 6.8e-79 299.3 462 40.5
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 8.9e-79 298.9 571 36.3
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 8.3e-77 292.4 552 36.1
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 1.7e-74 284.6 645 33.2
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 8.0e-72 275.8 594 33.5
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 5.8e-70 269.6 593 33.9
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 7.5e-70 269.2 607 35.1
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 4.9e-69 266.5 612 32.7
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 3.2e-68 263.8 568 33.1
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 4.1e-68 263.5 600 34.5
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 1.0e-66 258.8 600 32.7
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 3.0e-66 257.3 152 85.5
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 6.6e-66 256.1 585 32.3
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 1.1e-65 255.4 366 40.4
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.5e-65 254.2 555 35.3
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 2.5e-65 254.2 594 33.0
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.6e-64 251.5 594 33.0
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 3.6e-64 250.4 292 51.7
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 1.4e-63 248.4 556 32.2
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.8e-63 248.1 602 33.9
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.6e-62 244.2 545 34.9
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 3.9e-58 230.3 598 31.8
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 5.1e-58 229.9 527 33.4
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 2.5e-57 227.6 596 31.0
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 4.7e-56 223.4 598 31.3
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 1.1e-55 222.2 540 31.3
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 1.4e-55 221.9 554 31.8
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.8e-55 221.5 572 30.4
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 1.2e-54 218.8 580 30.2
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 2.0e-54 218.0 537 31.7
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 2.2e-53 214.5 544 30.9
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 1.6e-51 208.4 580 30.3
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 2.1e-51 208.0 401 34.7
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 7.8e-51 206.1 573 31.1
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 1.0e-50 205.7 554 32.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.9e-49 201.4 367 37.1
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 6.2e-48 196.4 584 29.6
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.1e-47 195.7 569 28.8
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 3.1e-47 194.1 234 48.7
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 8.9e-47 192.6 578 29.1
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 1.5e-46 191.8 585 30.9
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 2.6e-46 191.0 404 33.4
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 4.4e-46 190.3 289 41.9
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 4.4e-46 190.3 563 29.3
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 4.4e-46 190.3 563 29.3
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 1.3e-45 188.7 517 29.4
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 2.2e-45 188.0 519 29.7
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 2.1e-43 181.4 578 28.7
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 6.2e-40 169.9 572 29.4
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 1.5e-38 165.2 551 29.2
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 3.8e-37 160.6 516 28.7
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 4.2e-36 157.1 539 28.0
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 9.3e-36 156.0 543 27.8
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 3.5e-35 154.1 541 29.8
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 2.8e-32 144.4 392 32.7
TPR.G18438 Trifolium pratense HOM05D006728 ORTHO05D007911 9.3e-28 129.4 142 53.5
arahy.Tifrunner.gnm1.ann1.Z8YKXQ Arachis hypogaea HOM05D006728 ORTHO05D007911 9.6e-25 119.4 150 50.0
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.6e-24 118.6 199 36.2
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 2.5e-20 104.8 440 26.4
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 4.6e-19 100.5 56 87.5
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 1.1e-17 95.9 129 45.7
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 3.1e-15 87.8 438 23.3
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 7.6e-14 83.2 192 29.7
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 1.1e-07 62.8 461 22.8


User provided reference genes

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