Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.6e-143 512.7 248 100.0
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 5.0e-137 491.1 248 96.0
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 7.7e-114 414.1 248 81.5
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 2.2e-113 412.5 246 82.9
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.9e-104 382.9 247 74.5
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.6e-103 379.8 248 74.6
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 6.1e-103 377.9 238 75.6
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.0e-102 377.1 238 75.6
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.4e-102 376.7 233 77.3
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 5.7e-101 371.3 248 73.8
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.4e-99 366.7 252 70.2
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 4.1e-99 365.2 248 69.0
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 4.1e-99 365.2 248 72.2
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 9.1e-99 364.0 247 69.6
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.2e-98 363.6 258 69.0
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.6e-98 363.2 217 76.0
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 7.7e-98 360.9 217 76.0
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.3e-97 359.4 217 75.6
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 2.3e-97 359.4 217 75.1
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 5.0e-97 358.2 239 71.5
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 6.6e-97 357.8 256 69.5
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 8.6e-97 357.5 246 71.1
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 1.5e-96 356.7 248 69.0
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.5e-96 356.7 217 75.1
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.9e-96 356.3 217 75.1
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 5.5e-96 354.8 248 70.2
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 9.5e-96 354.0 248 67.3
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.2e-95 353.6 217 75.1
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.6e-95 353.2 240 70.0
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.8e-95 352.4 240 70.0
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.6e-95 352.1 240 69.6
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.0e-94 350.5 215 75.3
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.0e-94 350.5 248 67.7
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.4e-94 350.1 215 74.0
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.8e-94 349.7 255 66.3
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.8e-94 349.7 219 73.1
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.8e-94 349.7 217 74.2
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.8e-94 349.7 214 73.8
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 1.8e-94 349.7 215 74.0
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 2.3e-94 349.4 218 72.5
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 3.0e-94 349.0 217 74.2
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 5.2e-94 348.2 234 70.9
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 6.8e-94 347.8 215 73.5
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 8.9e-94 347.4 243 69.1
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.2e-93 347.1 237 68.8
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.2e-93 347.1 221 71.0
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 1.5e-93 346.7 249 67.9
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.0e-93 346.3 249 65.9
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.4e-93 345.5 215 72.1
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 3.4e-93 345.5 217 74.2
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 5.7e-93 344.7 217 73.7
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 9.8e-93 344.0 212 72.2
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.3e-92 343.6 215 71.6
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.3e-92 343.6 215 71.6
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.3e-92 343.6 245 67.3
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 2.2e-92 342.8 218 74.3
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 6.3e-92 341.3 215 72.1
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.8e-91 339.7 220 71.8
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.4e-91 339.3 215 71.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 3.1e-91 339.0 215 72.6
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.0e-91 337.8 229 70.3
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 9.2e-91 337.4 241 64.7
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 9.2e-91 337.4 217 72.4
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.0e-90 336.3 239 65.7
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 5.9e-90 334.7 217 71.4
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 7.8e-90 334.3 241 63.5
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.8e-90 334.3 239 67.4
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.7e-89 333.2 242 63.2
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 3.8e-89 332.0 246 65.9
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 5.0e-89 331.6 241 63.5
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 5.0e-89 331.6 214 72.9
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 5.0e-89 331.6 237 65.8
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 6.6e-89 331.3 217 67.7
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-88 330.5 243 62.1
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.5e-88 330.1 217 71.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.9e-88 329.7 217 67.3
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 2.5e-88 329.3 243 61.7
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.5e-88 329.3 233 67.0
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 2.5e-88 329.3 215 70.2
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 7.3e-88 327.8 217 66.8
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.3e-88 327.8 217 66.4
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 7.3e-88 327.8 223 69.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.2e-87 327.0 242 62.0
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-87 326.6 217 66.4
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-87 326.6 217 66.4
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 2.8e-87 325.9 241 61.8
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 3.6e-87 325.5 248 60.9
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 3.6e-87 325.5 242 62.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 8.0e-87 324.3 217 65.0
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 2.3e-86 322.8 195 74.4
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 6.8e-86 321.2 268 59.7
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 8.9e-86 320.9 241 62.2
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 8.9e-86 320.9 234 64.1
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 7.5e-85 317.8 223 68.2
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.7e-84 316.6 325 51.4
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 2.2e-84 316.2 226 66.8
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 4.9e-84 315.1 217 67.3
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 8.3e-76 287.7 205 66.8
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 5.4e-75 285.0 192 71.4
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 7.0e-75 284.6 222 61.7
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.9e-72 276.6 196 69.4
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 7.3e-72 274.6 166 74.7
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 7.8e-66 254.6 212 59.0
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 2.8e-63 246.1 234 52.6
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.8e-60 235.7 215 52.6
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 9.2e-59 231.1 191 60.7
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 6.6e-57 224.9 217 49.3
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.6e-53 213.0 141 70.9
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 3.3e-48 196.1 130 71.5
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 9.9e-45 184.5 229 45.4
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 2.9e-44 183.0 100 80.0
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 6.9e-38 161.8 210 41.4
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.7e-34 149.8 96 70.8
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.7e-34 149.8 217 39.6
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 8.7e-33 144.8 210 39.0
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 1.4e-30 137.5 145 50.3
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 1.4e-30 137.5 145 50.3
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.8e-30 137.1 115 60.9
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.9e-30 135.2 88 71.6
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.4e-29 132.9 82 73.2
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.4e-29 132.9 82 73.2
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 1.2e-26 124.4 95 63.2
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 7.4e-24 115.2 119 52.1
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-23 113.6 79 68.4
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.1e-22 109.8 62 77.4
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.2e-19 99.8 82 59.8
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.6e-18 97.4 190 33.2
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 2.7e-18 96.7 66 68.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 3.3e-16 89.7 179 35.8
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 7.4e-16 88.6 171 31.6
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.4e-14 83.6 55 67.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.5e-13 80.9 48 72.9
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 9.4e-11 71.6 72 54.2


User provided reference genes

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