Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 2.8e-135 485.3 254 100.0
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 2.4e-131 472.2 254 97.2
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 6.2e-127 457.6 252 94.8
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 5.8e-125 451.1 252 93.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 1.3e-124 449.9 252 92.1
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 3.8e-124 448.4 252 90.9
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.9e-123 446.0 252 92.5
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 2.4e-123 445.7 252 91.3
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 5.5e-123 444.5 282 84.4
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.1e-122 442.6 252 90.9
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 6.7e-121 437.6 252 87.7
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 86.9
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 3.7e-119 431.8 250 88.8
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 4.8e-119 431.4 252 88.1
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 4.8e-119 431.4 252 87.7
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 6.2e-119 431.0 252 87.7
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 6.2e-119 431.0 253 88.1
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 88.1
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 87.7
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 1.4e-118 429.9 250 86.0
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.4e-118 429.9 252 86.1
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 87.7
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 2.4e-118 429.1 252 86.5
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 4.0e-118 428.3 252 87.3
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 5.3e-118 427.9 252 88.1
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 6.9e-118 427.6 252 86.9
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 9.0e-118 427.2 252 85.3
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 9.0e-118 427.2 252 84.1
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 85.7
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 86.5
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 85.7
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 4.5e-117 424.9 251 84.9
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 1.0e-116 423.7 252 85.7
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 84.9
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 86.5
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 84.9
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 86.9
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 6.5e-116 421.0 254 85.4
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 8.4e-116 420.6 252 85.3
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 86.1
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 3.2e-115 418.7 254 85.4
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 87.3
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 85.3
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 84.9
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 1.2e-114 416.8 250 83.6
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.2e-114 416.8 253 85.4
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 84.5
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 84.5
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 83.7
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 4.6e-114 414.8 284 76.8
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.0e-113 413.7 253 85.8
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 82.5
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.3e-113 413.3 249 83.5
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.3e-113 413.3 252 84.1
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.8e-113 412.9 252 83.3
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 81.7
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.1
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 2.3e-113 412.5 256 82.8
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.1
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 83.3
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 3.9e-113 411.8 256 82.8
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 84.5
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 82.5
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 83.3
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 5.7e-112 407.9 252 83.7
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 7.4e-112 407.5 252 84.1
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 9.6e-112 407.1 253 83.8
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 1.4e-110 403.3 260 80.8
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 9.0e-110 400.6 253 80.2
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.5e-109 399.8 252 79.4
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 4.5e-109 398.3 253 79.1
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 81.3
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 2.2e-108 396.0 252 78.2
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 2.2e-108 396.0 239 83.3
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 5.0e-108 394.8 252 79.4
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 5.0e-108 394.8 252 79.4
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 1.1e-107 393.7 252 77.8
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 1.9e-107 392.9 252 77.4
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.9e-107 392.9 252 77.8
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 9.3e-107 390.6 252 77.4
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 2.1e-106 389.4 252 79.4
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 3.5e-106 388.7 283 73.1
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 6.1e-106 387.9 254 78.3
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 6.1e-106 387.9 251 78.9
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 7.9e-106 387.5 250 79.2
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 7.9e-106 387.5 250 79.2
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.1e-104 383.6 274 77.0
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 1.3e-103 380.2 252 78.2
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 6.3e-103 377.9 260 75.8
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 8.2e-103 377.5 256 76.6
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 4.5e-101 371.7 256 74.6
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 4.6e-98 361.7 221 83.3
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 3.0e-97 359.0 252 73.0
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 1.5e-96 356.7 254 70.9
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 3.3e-96 355.5 252 72.6
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 4.1e-94 348.6 252 71.4
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 2.0e-93 346.3 267 67.0
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 3.4e-93 345.5 252 73.4
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 2.3e-89 332.8 260 69.6
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.5e-88 330.1 190 87.9
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 2.7e-82 309.3 274 65.0
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 5.2e-81 305.1 176 86.4
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 6.7e-81 304.7 191 81.2
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 2.0e-80 303.1 177 86.4
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 9.7e-80 300.8 177 85.9
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.1e-78 297.4 229 69.0
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 1.2e-77 293.9 254 61.0
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 3.4e-72 275.8 255 56.9
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 7.0e-70 268.1 278 52.9
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 8.0e-66 254.6 145 88.3
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 2.2e-63 246.5 251 52.6
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-62 244.2 252 55.2
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 3.3e-59 232.6 147 81.0
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.6e-56 223.0 261 48.7
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 6.8e-49 198.4 123 78.9
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 7.8e-37 158.3 91 83.5
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 1.6e-34 150.6 96 74.0
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 6.8e-33 145.2 108 74.1
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 9.6e-27 124.8 86 72.1
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 1.4e-17 94.4 63 73.0
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 8.4e-15 85.1 48 87.5
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.3e-10 71.2 34 88.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 4.0e-09 66.2 48 68.8


User provided reference genes

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