Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G177800 Glycine max HOM05D008269 ORTHO05D010153 8.5e-68 260.4 148 100.0
Glyma.20G212300 Glycine max HOM05D008269 ORTHO05D010153 7.5e-56 220.7 149 89.3
Phvul.007G111700 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 5.7e-48 194.5 149 75.2
VMungo0720G1499 Vigna mungo HOM05D008269 ORTHO05D010153 1.8e-41 172.9 136 77.2
Glyma.16G204500 Glycine max HOM05D008269 ORTHO05D010153 1.7e-23 113.2 147 61.2
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 5.6e-19 98.2 139 51.8
Glyma.09G153700 Glycine max HOM05D008269 ORTHO05D010153 2.3e-17 92.8 151 53.0
Lalb_Chr01g0008831 Lupinus albus HOM05D008269 ORTHO05D010153 3.1e-17 92.4 147 53.7
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 4.0e-17 92.0 155 45.8
Lalb_Chr03g0033111 Lupinus albus HOM05D008269 ORTHO05D010153 1.3e-15 87.0 145 53.1
Psat1g109760 Pisum sativum HOM05D008269 ORTHO05D010153 4.1e-14 82.0 164 44.5
Lalb_Chr19g0131321 Lupinus albus HOM05D008269 ORTHO05D010153 5.6e-11 71.6 159 42.1
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 9.5e-11 70.9 170 35.3
Medtr6g060660 Medicago truncatula HOM05D008269 ORTHO05D010153 4.7e-10 68.6 165 41.2
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 8.1e-10 67.8 147 38.1
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 2.0e-08 63.2 135 43.0
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 7.6e-08 61.2 138 35.5
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 2.2e-07 59.7 133 33.8
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 2.2e-07 59.7 157 34.4
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 6.4e-07 58.2 140 29.3
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 1.1e-06 57.4 140 33.6
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 1.9e-06 56.6 149 31.5
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 1.9e-06 56.6 139 36.0
Lj2g0014899 Lotus japonicus HOM05D008269 ORTHO05D010153 2.4e-06 56.2 153 39.2
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 2.4e-06 56.2 132 37.1
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 2.4e-06 56.2 145 35.2
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 2.4e-06 56.2 145 31.7
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 4.2e-06 55.5 145 32.4
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.4e-06 55.1 118 39.8


User provided reference genes

Program Settings