Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G144400 Glycine max HOM05D010135 ORTHO05D011377 8.4e-45 183.3 94 100.0
Glyma.20G093300 Glycine max HOM05D010135 ORTHO05D011377 4.9e-37 157.5 100 85.0
Phvul.007G204200 Phaseolus vulgaris HOM05D010135 ORTHO05D011377 6.4e-29 130.6 102 74.5
VMungo0720G3097 Vigna mungo HOM05D001037 ORTHO05D011377 3.3e-25 118.2 88 76.1
Lj5g0007613 Lotus japonicus HOM05D010135 ORTHO05D011377 8.4e-21 103.6 102 63.7
Lalb_Chr21g0310111 Lupinus albus HOM05D010135 ORTHO05D011377 6.7e-18 94.0 97 58.8
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 8.2e-16 87.0 92 56.5
Prupe.6G306400 Prunus persica HOM05D010135 ORTHO05D011377 1.0e-13 80.1 103 53.4
Psat6g155320 Pisum sativum HOM05D029395 ORTHO05D011377 1.6e-11 72.8 103 55.3
QL03p009441 Quercus lobata HOM05D010135 ORTHO05D011377 1.6e-11 72.8 102 53.9
QL93p2005_0018 Quercus lobata HOM05D010135 ORTHO05D011377 1.6e-11 72.8 102 53.9
RcHm_v2.0_Chr3g0458221 Rosa chinensis HOM05D008705 ORTHO05D011377 1.4e-10 69.7 103 42.7
TPR.G2617 Trifolium pratense HOM05D029395 ORTHO05D011377 1.4e-10 69.7 103 51.5
Medtr1g084780 Medicago truncatula HOM05D029395 ORTHO05D011377 1.8e-10 69.3 89 56.2
MD12G1201300 Malus domestica HOM05D010135 ORTHO05D011377 5.1e-10 67.8 101 47.5
Ca_10192_v3 Cicer arietinum L. HOM05D029395 ORTHO05D011377 4.3e-09 64.7 101 53.5
Thecc.05G328000 Theobroma cacao HOM05D010135 ORTHO05D011377 4.3e-09 64.7 87 52.9
Haze_04005 Corylus avellana HOM05D010135 ORTHO05D011377 2.8e-08 62.0 110 44.5
FvH4_6g08340 Fragaria vesca HOM05D008705 ORTHO05D011377 6.3e-08 60.8 107 38.3
FAN14G0920 Fragaria x ananassa HOM05D008705 ORTHO05D011377 6.3e-08 60.8 107 38.3
Dinv24500 Davidia involucrata HOM05D001037 ORTHO05D000888 8.2e-08 60.5 84 53.6
GSVIVG01031312001 Vitis vinifera HOM05D000039 ORTHO05D000815 8.2e-08 60.5 74 51.4
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.1e-07 60.1 78 43.6
Sabra13G0003500 Salix brachista HOM05D010135 ORTHO05D011377 2.4e-07 58.9 92 45.7
Potri.013G004300 Populus trichocarpa HOM05D010135 ORTHO05D011377 1.5e-06 56.2 92 48.9
Aqoxy2G02560 Aquilegia oxysepala HOM05D010135 ORTHO05D011377 3.4e-06 55.1 82 41.5


User provided reference genes

Program Settings