Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G141300 Glycine max HOM05D008878 ORTHO05D010972 3.6e-55 218.0 109 100.0
Glyma.20G089900 Glycine max HOM05D008878 ORTHO05D010972 5.9e-50 200.7 105 94.3
Phvul.007G206900 Phaseolus vulgaris HOM05D008878 ORTHO05D010972 4.4e-45 184.5 101 88.1
Lalb_Chr02g0147361 Lupinus albus HOM05D008878 ORTHO05D010972 9.4e-40 166.8 105 75.2
Psat6g156760 Pisum sativum HOM05D008878 ORTHO05D010972 1.3e-36 156.4 105 76.2
Medtr1g085190 Medicago truncatula HOM05D008878 ORTHO05D010972 1.6e-34 149.4 107 76.6
TPR.G3072 Trifolium pratense HOM05D008878 ORTHO05D010972 3.5e-34 148.3 107 76.6
Lj5g0023056 Lotus japonicus HOM05D008878 ORTHO05D010972 4.5e-34 147.9 107 74.8
QL03p011407 Quercus lobata HOM05D008878 ORTHO05D010972 5.7e-29 131.0 104 65.4
Eucgr.H01348 Eucalyptus grandis HOM05D008878 ORTHO05D010972 3.8e-25 118.2 103 56.3
Cfa004402 Carpinus fangiana HOM05D008878 ORTHO05D010972 2.8e-23 112.1 102 55.9
Prupe.6G302300 Prunus persica HOM05D008878 ORTHO05D010972 1.8e-22 109.4 96 57.3
Nitab4.5_0000081g0040 Nicotiana tabacum HOM05D008878 ORTHO05D010972 4.5e-18 94.7 101 51.5
Manes.08G105922 Manihot esculenta HOM05D008878 ORTHO05D010972 1.0e-17 93.6 113 50.4
Nitab4.5_0010076g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 6.6e-17 90.9 93 53.8
FAN05G4981 Fragaria x ananassa HOM05D008878 ORTHO05D010972 8.6e-17 90.5 90 54.4
FAN05G5213 Fragaria x ananassa HOM05D008878 ORTHO05D010972 8.6e-17 90.5 90 54.4
FAN02G1425 Fragaria x ananassa HOM05D008878 ORTHO05D010972 2.5e-16 89.0 90 54.4
FAN09G4214 Fragaria x ananassa HOM05D008878 ORTHO05D010972 2.5e-16 89.0 90 53.3
Hma1.2p1_0052F.1_g030230 Hydrangea macrophylla HOM05D008878 ORTHO05D010972 1.2e-15 86.7 103 44.7
Oeu033223.1 Olea europaea HOM05D008878 ORTHO05D010972 1.6e-15 86.3 98 46.9
Peaxi162Scf00035g00092 Petunia axillaris HOM05D008878 ORTHO05D010972 3.6e-15 85.1 92 51.1
Nitab4.5_0006193g0030 Nicotiana tabacum HOM05D008878 ORTHO05D010972 3.0e-14 82.0 98 50.0
Solyc01g102420.1 Solanum lycopersicum HOM05D008878 ORTHO05D010972 8.9e-14 80.5 104 45.2
Nitab4.5_0004090g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 2.0e-13 79.3 103 46.6
Lsat_1_v5_gn_5_146741 Lactuca sativa HOM05D008878 ORTHO05D010972 5.8e-13 77.8 101 46.5
Rhsim11G0107100 Rhododendron simsii HOM05D008878 ORTHO05D010972 5.8e-13 77.8 112 49.1
DCAR_022332 Daucus carota HOM05D008878 ORTHO05D010972 1.7e-12 76.3 98 44.9
PGSC0003DMG400018274 Solanum tuberosum HOM05D008878 ORTHO05D010972 2.2e-12 75.9 97 45.4
Sopen01g044870 Solanum pennellii HOM05D008878 ORTHO05D010972 4.9e-12 74.7 97 45.4
Actinidia11704 Actinidia chinensis HOM05D008878 ORTHO05D010972 8.3e-12 73.9 105 44.8
Lsat_1_v5_gn_9_83921 Lactuca sativa HOM05D008878 ORTHO05D010972 3.2e-11 72.0 105 41.0
Migut.B00909 Erythranthe guttata HOM05D008878 ORTHO05D010972 2.7e-10 68.9 101 40.6
Potri.005G001001 Populus trichocarpa HOM05D008878 ORTHO05D010972 7.8e-10 67.4 95 45.3
TAR365G0428 Trochodendron aralioides HOM05D008878 ORTHO05D010972 1.7e-09 66.2 105 43.8
Actinidia11703 Actinidia chinensis HOM05D008878 ORTHO05D010972 3.9e-09 65.1 60 60.0
AUR62017867 Chenopodium quinoa HOM05D059084 ORTHO05D010972 4.3e-08 61.6 115 37.4
EL10Ac6g15322 Beta vulgaris HOM05D059084 ORTHO05D010972 5.6e-08 61.2 112 40.2
Ciclev10029949m.g Citrus clementina HOM05D008878 ORTHO05D010972 3.6e-07 58.5 89 44.9
DCAR_029307 Daucus carota HOM05D008878 ORTHO05D010972 1.1e-06 57.0 68 48.5


User provided reference genes

Program Settings