Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.4e-130 469.9 289 100.0
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.4e-127 459.9 249 98.0
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 1.2e-121 440.3 249 94.4
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 2.6e-121 439.1 249 94.8
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.3e-117 426.0 249 92.4
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 3.0e-117 425.6 249 92.0
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.8e-114 416.4 250 90.4
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 3.4e-113 412.1 249 88.0
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 4.2e-111 405.2 248 87.5
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.6e-110 403.3 248 86.7
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 3.1e-106 389.0 251 84.5
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 3.1e-106 389.0 251 84.1
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 5.3e-106 388.3 252 84.1
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 7.9e-102 374.4 249 82.3
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 4.8e-99 365.2 249 79.9
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 2.4e-98 362.8 250 81.6
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 4.0e-98 362.1 249 79.5
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 9.0e-98 360.9 249 78.7
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.5e-97 358.6 249 78.3
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.3e-96 357.1 249 78.3
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.9e-96 355.9 254 78.0
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 4.9e-96 355.1 267 74.9
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 1.4e-95 353.6 249 77.1
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 3.2e-95 352.4 250 78.0
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 9.3e-95 350.9 249 77.5
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.1e-93 345.1 249 76.7
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.1e-92 344.0 267 73.0
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 2.5e-92 342.8 249 74.7
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 3.3e-92 342.4 270 71.9
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 7.4e-92 341.3 253 74.7
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.3e-91 340.5 269 71.7
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.6e-91 340.1 255 73.3
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.6e-91 340.1 250 76.0
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 2.8e-91 339.3 257 72.0
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 6.3e-91 338.2 252 74.6
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 8.2e-91 337.8 250 76.4
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 8.2e-91 337.8 260 72.7
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.1e-90 337.4 260 72.3
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 1.1e-90 337.4 249 73.9
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.4e-90 337.0 269 70.6
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 3.1e-90 335.9 254 72.8
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 6.9e-90 334.7 253 73.5
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 6.9e-90 334.7 257 71.6
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 9.0e-90 334.3 277 69.0
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 9.0e-90 334.3 273 70.0
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 1.5e-89 333.6 247 74.1
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.5e-89 333.6 281 70.1
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 4.5e-89 332.0 249 74.7
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 5.9e-89 331.6 249 75.1
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 5.9e-89 331.6 249 72.7
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.0e-88 330.9 252 74.2
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.0e-88 330.9 269 70.3
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.0e-88 330.9 250 73.6
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 2.9e-88 329.3 267 70.0
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 6.5e-88 328.2 249 71.9
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 6.5e-88 328.2 249 72.7
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 2.5e-87 326.2 259 69.9
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 3.2e-87 325.9 249 73.1
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 5.5e-87 325.1 248 73.0
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 5.5e-87 325.1 249 72.7
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 7.2e-87 324.7 249 71.9
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 2.1e-86 323.2 252 73.0
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 6.1e-86 321.6 249 71.5
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 6.1e-86 321.6 249 71.5
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.0e-85 320.9 252 73.4
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.4e-85 320.5 261 70.5
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 3.0e-85 319.3 251 70.9
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.0e-85 319.3 213 80.8
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 5.1e-85 318.5 252 73.4
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 8.8e-85 317.8 261 67.4
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 2.0e-84 316.6 259 68.0
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 2.5e-84 316.2 215 77.7
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 4.3e-84 315.5 278 64.0
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 4.3e-84 315.5 293 62.1
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 5.7e-84 315.1 251 69.3
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.2e-83 313.2 249 71.1
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 8.2e-83 311.2 253 69.2
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.2e-83 311.2 253 69.2
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.4e-82 309.7 253 68.8
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.3e-80 303.9 257 67.7
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.3e-80 303.9 257 67.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.1e-79 300.8 249 69.5
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-78 297.0 282 62.1
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.0e-77 294.3 249 66.7
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.8e-77 293.5 249 67.5
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 3.0e-77 292.7 247 66.4
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.7e-75 287.0 182 84.1
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.1e-74 284.3 258 63.2
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.8e-74 283.5 253 66.4
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 1.9e-71 273.5 257 61.1
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.2e-70 270.8 231 66.7
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.2e-70 270.8 280 57.9
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 3.0e-69 266.2 254 63.8
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.3e-68 262.7 175 80.0
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 4.4e-68 262.3 257 62.6
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 9.7e-68 261.2 175 81.7
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 3.7e-67 259.2 253 60.5
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.6e-65 253.8 255 63.9
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 2.5e-63 246.5 374 45.7
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.2e-62 244.2 256 59.4
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 3.0e-61 239.6 253 57.3
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 7.2e-55 218.4 258 55.0
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 5.7e-52 208.8 135 84.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 6.3e-51 205.3 198 60.1
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.8e-46 189.9 158 69.0
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 6.6e-40 168.7 140 68.6
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.9e-39 167.2 181 56.4
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.9e-39 167.2 134 70.9
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 3.0e-32 143.3 139 60.4
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.2e-30 137.9 134 61.9
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 1.1e-29 134.8 77 88.3
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.1e-29 133.3 115 65.2
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 7.3e-23 112.1 116 57.8
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.6e-16 89.0 83 63.9
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 8.6e-16 88.6 79 67.1
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.6e-15 85.9 74 66.2
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 5.6e-15 85.9 113 45.1
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.0e-08 65.1 42 71.4
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 6.6e-08 62.4 72 56.9
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 7.3e-07 58.9 163 31.9
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.6e-06 57.8 68 54.4


User provided reference genes

Program Settings