Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 3.1e-249 864.8 460 100.0
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 7.4e-187 657.5 445 83.1
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 1.2e-152 543.9 444 72.1
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 2.4e-145 519.6 446 67.9
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 2.1e-141 506.5 449 66.4
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 6.2e-141 505.0 446 67.0
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 3.4e-139 499.2 446 65.7
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 1.1e-137 494.2 445 65.6
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 9.5e-134 481.1 446 63.9
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 1.1e-132 477.6 399 68.4
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 3.2e-129 466.1 446 63.0
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 1.4e-124 450.7 448 61.4
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 2.4e-116 423.3 448 58.5
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 1.7e-111 407.1 499 56.3
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 1.7e-50 204.5 477 38.2
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.7e-50 204.5 477 40.3
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 1.7e-50 204.5 470 38.5
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.9e-50 203.8 478 40.2
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 3.8e-50 203.4 474 35.9
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 5.0e-50 203.0 478 40.0
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 8.5e-50 202.2 478 40.4
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 2.5e-49 200.7 477 39.0
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 3.6e-48 196.8 472 39.2
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 8.0e-48 195.7 476 37.4
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 1.4e-47 194.9 480 36.9
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 5.2e-47 193.0 479 37.4
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 2.6e-46 190.7 457 36.1
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 9.8e-46 188.7 476 37.2
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 9.1e-44 182.2 457 35.7
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 1.3e-42 178.3 513 35.1
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 2.5e-41 174.1 462 36.8
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 1.0e-39 168.7 470 37.2
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 1.4e-39 168.3 464 36.6
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 4.0e-39 166.8 456 37.5
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.5e-38 162.5 484 35.7
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 1.7e-37 161.4 453 34.7
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.1e-36 158.7 463 36.9
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 3.1e-36 157.1 488 34.0
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 7.0e-36 156.0 456 36.0
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 7.0e-36 156.0 467 36.0
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 9.2e-36 155.6 470 34.7
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.6e-35 154.8 456 35.5
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 2.0e-35 154.5 502 33.1
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 5.9e-35 152.9 481 34.9
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.3e-34 151.8 454 35.5
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 1.7e-34 151.4 492 31.9
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.7e-34 151.4 485 33.2
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.1e-33 148.7 459 34.9
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.5e-33 147.5 435 33.1
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 1.2e-32 145.2 500 31.6
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.2e-32 145.2 477 34.2
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 4.7e-32 143.3 471 33.8
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 6.1e-32 142.9 478 33.5
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 8.0e-32 142.5 474 33.1
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.9e-29 133.3 456 32.9
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 4.9e-29 133.3 497 31.6
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 6.4e-29 132.9 483 31.9
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 7.8e-27 125.9 434 30.4
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 2.3e-26 124.4 486 32.9
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 5.6e-25 119.8 479 30.9
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 9.5e-25 119.0 476 32.1
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 3.6e-24 117.1 462 30.7
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 1.2e-22 112.1 486 29.6
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 4.4e-22 110.2 441 29.5
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 2.4e-20 104.4 463 29.2
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 1.2e-19 102.1 463 30.9
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 3.5e-19 100.5 494 27.9
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 6.0e-19 99.8 291 33.3
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 3.9e-18 97.1 478 30.1
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 8.6e-18 95.9 487 27.5
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 1.1e-17 95.5 488 29.7
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.9e-17 94.7 489 27.8
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 4.3e-17 93.6 460 28.7
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 7.3e-17 92.8 465 30.1
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 1.2e-16 92.0 159 45.3
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 8.1e-16 89.4 389 29.6
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 5.2e-15 86.7 489 30.5
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 6.8e-15 86.3 493 28.2
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 5.8e-14 83.2 463 27.9
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 9.9e-14 82.4 453 28.5
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 2.9e-13 80.9 458 29.5
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 5.4e-12 76.6 458 28.8
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 7.1e-12 76.3 469 27.9
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 9.2e-12 75.9 428 27.6
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 1.3e-10 72.0 473 26.0
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 3.9e-10 70.5 463 29.6
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 5.1e-10 70.1 469 28.4
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 1.1e-09 68.9 490 28.0
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 1.5e-09 68.6 489 27.4
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 1.9e-09 68.2 461 26.7
Actinidia11386 Actinidia chinensis HOM05D003628 ORTHO05D004253 2.5e-09 67.8 426 27.2
Gohir.D04G051401 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.5e-09 67.8 63 69.8
Gohir.A02G090400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.3e-09 67.0 70 64.3
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 9.5e-09 65.9 465 27.3
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 1.2e-08 65.5 454 26.2
Gorai.004G113400 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.2e-08 65.5 63 66.7
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 6.2e-08 63.2 447 26.6
HPP92_026453 Vanilla planifolia HOM05D003628 ORTHO05D004253 6.2e-08 63.2 88 52.3
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 8.1e-08 62.8 345 27.0
Gohir.D12G066350 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.1e-08 62.8 63 65.1
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 3.4e-06 57.4 459 26.8
CDE04G1765 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 5.8e-06 56.6 263 28.1
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 9.9e-06 55.8 475 26.7


User provided reference genes

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