Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 6.2e-55 217.2 111 100.0
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 6.2e-55 217.2 111 100.0
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 7.1e-51 203.8 104 98.1
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 5.6e-48 194.1 103 94.2
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 3.4e-45 184.9 104 87.5
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 6.4e-44 180.6 103 87.4
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 8.4e-44 180.3 103 84.5
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.1e-43 179.9 103 86.4
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 1.4e-43 179.5 103 86.4
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 1.4e-43 179.5 103 85.4
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 2.7e-42 175.3 104 83.7
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 7.3e-40 167.2 106 78.3
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 8.1e-39 163.7 104 76.9
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 1.1e-38 163.3 104 77.9
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 6.4e-36 154.1 104 74.0
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.1e-35 153.3 103 71.8
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 1.2e-34 149.8 104 70.2
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 1.6e-34 149.4 103 68.9
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 1.6e-34 149.4 104 70.2
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 2.1e-34 149.1 104 70.2
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 2.7e-34 148.7 104 70.2
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 3.5e-34 148.3 104 71.2
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 4.6e-34 147.9 99 73.7
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 6.0e-34 147.5 104 68.3
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 6.0e-34 147.5 100 70.0
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 7.9e-34 147.1 106 68.9
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 1.0e-33 146.7 100 71.0
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 1.8e-33 146.0 107 68.2
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 1.8e-33 146.0 104 68.3
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 3.0e-33 145.2 99 71.7
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.9e-33 144.8 100 72.0
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.9e-33 144.8 99 70.7
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 3.9e-33 144.8 103 68.9
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 5.1e-33 144.4 100 72.0
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 5.1e-33 144.4 100 71.0
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 5.1e-33 144.4 103 69.9
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 1.1e-32 143.3 107 67.3
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.5e-32 142.9 103 67.0
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 1.9e-32 142.5 107 67.3
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.9e-32 142.5 103 66.0
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 2.5e-32 142.1 107 66.4
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 3.3e-32 141.7 100 68.0
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 4.3e-32 141.4 104 68.3
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 5.6e-32 141.0 103 65.0
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 5.6e-32 141.0 104 66.3
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 7.4e-32 140.6 100 69.0
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 7.4e-32 140.6 100 67.0
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 9.6e-32 140.2 107 65.4
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 1.3e-31 139.8 100 67.0
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 1.6e-31 139.4 107 64.5
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 2.8e-31 138.7 104 66.3
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 2.8e-31 138.7 107 66.4
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 2.8e-31 138.7 107 66.4
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 4.8e-31 137.9 104 65.4
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 4.8e-31 137.9 100 65.0
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 6.2e-31 137.5 107 62.6
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 8.1e-31 137.1 100 67.0
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 1.4e-30 136.3 103 64.1
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 1.8e-30 136.0 109 65.1
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.8e-30 136.0 103 63.1
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 1.8e-30 136.0 102 65.7
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 3.1e-30 135.2 100 65.0
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 4.0e-30 134.8 103 63.1
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 4.0e-30 134.8 103 63.1
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 4.0e-30 134.8 103 63.1
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 5.3e-30 134.4 103 67.0
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 5.3e-30 134.4 107 63.6
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 6.9e-30 134.0 103 63.1
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 9.0e-30 133.7 103 63.1
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 9.0e-30 133.7 103 64.1
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 1.2e-29 133.3 103 61.2
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 1.2e-29 133.3 99 65.7
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.6e-29 132.1 102 65.7
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 3.4e-29 131.7 103 62.1
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.4e-29 131.7 102 65.7
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 5.8e-29 131.0 98 63.3
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 9.9e-29 130.2 109 60.6
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 9.9e-29 130.2 103 62.1
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 9.9e-29 130.2 106 60.4
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 1.3e-28 129.8 107 58.9
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 1.3e-28 129.8 102 63.7
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 1.7e-28 129.4 94 68.1
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.7e-28 129.4 99 61.6
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.9e-28 128.6 103 62.1
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 3.8e-28 128.3 101 62.4
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 3.8e-28 128.3 103 59.2
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 3.8e-28 128.3 99 66.7
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.1e-27 126.7 103 60.2
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 1.4e-27 126.3 103 63.1
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.9e-27 125.9 103 60.2
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.9e-27 125.9 102 58.8
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 1.9e-27 125.9 100 62.0
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 2.4e-27 125.6 107 57.0
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 4.2e-27 124.8 103 58.3
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 7.1e-27 124.0 103 61.2
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 7.1e-27 124.0 104 61.5
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 9.3e-27 123.6 98 64.3
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 2.1e-26 122.5 78 76.9
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 2.1e-26 122.5 99 58.6
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 4.6e-26 121.3 100 62.0
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 7.9e-26 120.6 82 72.0
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.3e-25 119.8 107 56.1
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 5.1e-25 117.9 82 75.6
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 8.7e-25 117.1 95 57.9
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.5e-24 115.5 82 69.5
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 4.3e-24 114.8 82 69.5
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 4.8e-23 111.3 99 57.6
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 1.2e-21 106.7 101 55.4
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.6e-18 96.3 99 47.5
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.6e-18 96.3 74 63.5
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 2.7e-18 95.5 100 49.0
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-16 90.1 60 76.7
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-16 90.1 60 76.7
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-16 90.1 60 76.7
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-16 90.1 60 76.7
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 3.3e-16 88.6 45 93.3
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 6.3e-15 84.3 54 70.4
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 8.2e-15 84.0 76 52.6
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 8.2e-15 84.0 91 49.5
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 2.0e-13 79.3 46 80.4
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 5.9e-13 77.8 62 58.1
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 5.5e-11 71.2 92 40.2
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 6.1e-10 67.8 62 53.2
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 2.3e-09 65.9 103 35.0
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.4e-06 56.6 41 70.7


User provided reference genes

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