Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 4.0e-185 651.4 345 100.0
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.3e-124 450.3 351 67.2
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 3.0e-124 449.1 350 67.1
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 1.4e-121 440.3 351 65.5
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 3.4e-120 435.6 345 66.1
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 5.1e-116 421.8 345 64.1
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 1.1e-113 414.1 349 64.2
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.3e-111 407.1 345 62.6
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 2.5e-110 402.9 381 57.7
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.5e-110 402.9 345 62.9
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 4.2e-110 402.1 345 61.7
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 4.7e-109 398.7 345 61.7
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 2.3e-108 396.4 346 61.6
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 3.0e-108 396.0 345 62.0
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 2.6e-107 392.9 345 60.9
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 9.7e-107 391.0 350 62.0
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 6.3e-106 388.3 345 60.6
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 5.9e-104 381.7 343 58.6
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 4.7e-93 345.5 346 55.2
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 5.4e-89 332.0 351 51.0
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 5.9e-88 328.6 345 53.0
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 6.5e-87 325.1 357 51.8
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 9.5e-86 321.2 353 52.4
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 9.5e-86 321.2 351 50.7
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.6e-85 320.5 345 51.6
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 2.1e-85 320.1 366 51.6
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 3.6e-85 319.3 345 50.4
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 8.8e-84 314.7 349 49.9
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 1.5e-83 313.9 342 51.5
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 2.0e-83 313.5 344 50.9
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 5.7e-83 312.0 350 51.7
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 5.7e-83 312.0 344 50.9
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 6.3e-82 308.5 352 48.6
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 1.4e-81 307.4 349 50.7
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 4.1e-81 305.8 347 50.1
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 7.0e-81 305.1 344 48.8
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 9.2e-81 304.7 344 49.1
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 2.0e-80 303.5 354 48.3
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 3.5e-80 302.8 344 48.5
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 4.5e-80 302.4 344 47.7
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 4.5e-80 302.4 354 48.9
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 5.9e-80 302.0 344 48.3
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 7.8e-80 301.6 345 47.0
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 1.0e-79 301.2 319 52.7
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.0e-79 301.2 352 49.7
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.9e-79 299.7 354 48.6
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 6.6e-79 298.5 354 48.6
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 6.6e-79 298.5 267 57.3
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 8.6e-79 298.1 346 49.4
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 1.9e-78 297.0 354 51.4
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 2.1e-77 293.5 346 47.1
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 2.8e-77 293.1 343 50.7
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 1.0e-76 291.2 349 47.0
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 1.0e-76 291.2 351 48.4
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 4.0e-76 289.3 377 44.8
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 5.2e-76 288.9 343 50.1
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 2.6e-75 286.6 348 46.6
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 4.4e-75 285.8 348 45.4
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 5.7e-75 285.4 329 48.0
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 9.8e-75 284.6 368 48.9
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.3e-74 284.3 345 46.1
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 1.7e-74 283.9 346 46.8
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.7e-74 283.9 320 49.7
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 2.2e-74 283.5 358 48.9
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 4.9e-74 282.3 318 48.4
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.4e-73 280.8 344 45.6
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 1.6e-72 277.3 374 43.6
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 2.0e-72 276.9 367 43.3
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 2.7e-72 276.6 320 48.4
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 4.6e-72 275.8 343 44.9
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 5.9e-72 275.4 369 43.9
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 5.9e-72 275.4 345 44.1
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.0e-71 274.6 345 44.6
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 3.9e-71 272.7 368 44.6
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 3.9e-71 272.7 372 43.0
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.1e-70 271.2 344 44.8
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 1.5e-70 270.8 344 45.1
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 5.6e-70 268.9 320 45.6
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 9.5e-70 268.1 313 47.0
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.2e-69 267.7 313 46.6
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.6e-69 267.3 313 47.3
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 2.8e-69 266.5 347 44.7
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 1.4e-68 264.2 319 44.5
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 1.4e-68 264.2 332 44.0
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 2.3e-68 263.5 352 44.6
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 3.1e-68 263.1 313 45.7
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.0e-68 262.7 353 43.6
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 4.0e-68 262.7 345 43.8
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 6.8e-68 261.9 345 44.3
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 8.9e-68 261.5 313 45.4
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 8.9e-68 261.5 360 46.4
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 2.0e-67 260.4 356 43.8
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 2.6e-67 260.0 322 46.0
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 4.9e-66 255.8 393 40.7
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 5.4e-65 252.3 366 44.8
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 6.0e-64 248.8 332 43.7
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 2.1e-61 240.4 295 47.8
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 2.8e-61 240.0 267 52.1
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 4.0e-60 236.1 210 58.1
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 2.0e-59 233.8 323 44.3
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 2.9e-58 229.9 271 47.2
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 3.1e-52 209.9 201 51.2
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 6.4e-50 202.2 243 46.9
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 4.7e-45 186.0 179 52.0
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 9.9e-43 178.3 250 37.6
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.9e-41 174.1 121 72.7
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.1e-37 160.6 362 34.5
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.2e-37 159.1 214 37.9
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 4.0e-36 156.4 212 39.2
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 2.0e-35 154.1 212 38.2
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.4e-35 153.3 215 38.1
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 3.4e-35 153.3 362 34.0
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 5.8e-35 152.5 117 69.2
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.3e-34 151.4 200 39.5
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 3.8e-34 149.8 333 34.8
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.1e-33 148.3 211 37.9
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.1e-33 148.3 331 34.4
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.4e-33 147.1 208 38.5
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.1e-33 145.6 202 38.6
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.3e-33 145.2 208 36.5
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 5.6e-30 136.0 217 36.4
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.8e-26 123.2 146 44.5
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 1.6e-21 107.8 163 34.4
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 2.5e-17 94.0 82 54.9
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 5.7e-14 82.8 129 39.5


User provided reference genes

Program Settings