Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 2.3e-102 375.6 184 100.0
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 1.9e-85 319.3 171 92.4
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 7.3e-85 317.4 171 91.8
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 1.6e-84 316.2 171 91.8
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 2.8e-84 315.5 171 91.2
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 2.8e-84 315.5 171 91.2
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 4.0e-83 311.6 171 90.1
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 7.5e-82 307.4 171 88.9
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.3e-81 306.6 171 88.9
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 2.4e-80 302.4 171 88.3
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 9.2e-80 300.4 171 87.7
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 3.5e-79 298.5 171 87.1
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.5e-77 293.1 171 86.0
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.5e-77 293.1 171 86.0
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.5e-77 293.1 171 86.0
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.5e-77 293.1 171 86.0
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 4.3e-77 291.6 171 84.8
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 9.5e-77 290.4 171 84.8
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 1.4e-75 286.6 171 84.2
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 2.0e-74 282.7 171 84.8
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 2.0e-74 282.7 171 84.8
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 1.6e-71 273.1 153 88.9
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 2.7e-71 272.3 171 80.7
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 2.7e-71 272.3 171 80.7
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 4.6e-71 271.6 153 88.2
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 6.0e-71 271.2 153 87.6
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 1.3e-70 270.0 183 76.0
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 3.0e-70 268.9 158 85.4
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 4.3e-69 265.0 171 79.5
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 6.2e-68 261.2 153 85.6
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.8e-67 259.6 153 85.0
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 8.9e-67 257.3 153 85.0
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 2.0e-66 256.1 148 85.8
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.8e-65 251.9 161 78.9
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 1.6e-63 246.5 183 71.0
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.8e-59 233.0 141 83.7
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 6.9e-59 231.1 133 85.0
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 7.1e-56 221.1 153 75.8
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.5e-55 218.8 167 68.9
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 1.9e-53 213.0 154 73.4
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 1.3e-52 210.3 153 73.9
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 3.2e-48 195.7 141 73.0
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 5.3e-35 151.8 111 71.2
BolSC28t60438H Brassica oleracea HOM05D003666 ORTHO05D004770 1.7e-33 146.7 76 90.8
Cfa023044 Carpinus fangiana HOM05D003666 ORTHO05D004770 2.9e-33 146.0 83 89.2
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 3.5e-31 139.0 159 53.5
BolC6t36214H Brassica oleracea HOM05D003666 ORTHO05D004770 3.9e-30 135.6 126 57.1
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 6.9e-27 124.8 74 85.1
Dinv06695 Davidia involucrata HOM05D003666 ORTHO05D004770 1.4e-24 117.1 65 89.2
SEGI_23011 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.5e-24 116.3 94 62.8
arahy.Tifrunner.gnm1.ann1.AQ5GJP Arachis hypogaea HOM05D003666 ORTHO05D004770 7.9e-23 111.3 90 68.9
TPR.G32909 Trifolium pratense HOM05D003666 ORTHO05D004770 6.7e-22 108.2 65 80.0
Lsat_1_v5_gn_3_105380 Lactuca sativa HOM05D003666 ORTHO05D004770 8.8e-22 107.8 60 90.0
arahy.Tifrunner.gnm1.ann1.W0GCEN Arachis hypogaea HOM05D003666 ORTHO05D004770 4.5e-18 95.5 54 90.7
Phvul.L002937 Phaseolus vulgaris HOM05D003666 ORTHO05D004770 8.5e-17 91.3 59 81.4
Solyc10g045750.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.6e-15 85.9 69 68.1
SHI15675 Sapria himalayana HOM05D003666 ORTHO05D004770 4.7e-15 85.5 157 40.8
BolSC28t60439H Brassica oleracea HOM05D003666 ORTHO05D004770 1.8e-14 83.6 57 77.2
SHI04382 Sapria himalayana HOM05D003666 ORTHO05D004770 2.0e-13 80.1 51 72.5
SHI21046 Sapria himalayana HOM05D003666 ORTHO05D004770 1.5e-08 63.9 34 82.4
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.9e-08 63.5 42 81.0
SHI36047 Sapria himalayana HOM05D003666 ORTHO05D004770 2.5e-08 63.2 36 80.6
SHI36048 Sapria himalayana HOM05D003666 ORTHO05D004770 7.2e-08 61.6 37 75.7
Nitab4.5_0001291g0020 Nicotiana tabacum HOM05D003666 ORTHO05D004770 8.0e-07 58.2 60 55.0


User provided reference genes

Program Settings