Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 1.2e-211 739.6 379 100.0
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.6e-195 686.0 380 93.9
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 5.2e-178 627.9 380 82.4
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 7.5e-177 624.0 380 82.4
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 2.3e-149 532.7 381 72.7
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 2.3e-149 532.7 381 72.7
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 3.9e-149 531.9 381 70.1
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 2.8e-147 525.8 385 69.1
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 8.1e-147 524.2 383 68.7
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 8.1e-147 524.2 383 68.4
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 2.4e-146 522.7 384 70.1
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 6.8e-146 521.2 386 69.4
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 2.2e-144 516.2 390 68.7
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 3.8e-144 515.4 383 68.7
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.8e-144 515.4 383 68.7
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.9e-144 515.0 384 68.2
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 6.4e-144 514.6 386 68.1
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 6.4e-144 514.6 386 68.9
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 8.4e-144 514.2 383 68.9
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 8.4e-144 514.2 384 68.2
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.1e-143 513.8 384 68.2
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 5.4e-143 511.5 386 70.5
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.1e-143 511.1 383 67.9
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.2e-142 510.4 389 66.8
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.6e-142 510.0 386 66.6
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 2.3e-141 506.1 380 66.3
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 5.1e-141 505.0 392 67.6
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 8.6e-141 504.2 389 66.8
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 8.6e-141 504.2 384 68.0
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 4.3e-140 501.9 387 66.7
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 9.6e-140 500.7 380 66.3
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 9.6e-140 500.7 387 66.7
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 1.6e-139 500.0 390 65.6
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 2.1e-139 499.6 387 68.5
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 2.8e-139 499.2 389 65.8
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 6.2e-139 498.0 385 65.7
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 6.2e-139 498.0 385 65.7
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 6.2e-139 498.0 408 65.2
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 6.2e-139 498.0 388 67.0
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.1e-138 497.3 386 65.8
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.4e-138 496.9 384 64.8
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.4e-138 496.9 383 66.3
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 2.4e-138 496.1 359 69.4
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.0e-138 495.4 383 66.1
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 4.0e-138 495.4 383 65.8
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 9.0e-138 494.2 388 64.9
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.5e-137 493.4 388 64.4
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 3.4e-137 492.3 380 66.3
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 3.4e-137 492.3 388 65.2
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 4.4e-137 491.9 397 66.0
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 7.6e-137 491.1 384 65.9
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 7.6e-137 491.1 387 65.1
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 1.3e-136 490.3 382 68.8
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 2.9e-136 489.2 388 64.9
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 3.8e-136 488.8 380 65.5
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 4.9e-136 488.4 384 67.7
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 4.9e-136 488.4 384 65.9
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 6.4e-136 488.0 394 64.0
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 2.4e-135 486.1 388 64.4
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 2.4e-135 486.1 380 67.4
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 3.2e-135 485.7 394 65.5
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 9.3e-135 484.2 381 66.7
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 1.2e-134 483.8 303 75.9
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 1.6e-134 483.4 303 75.6
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 3.5e-134 482.3 393 63.4
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 4.6e-134 481.9 384 65.1
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 4.6e-134 481.9 382 65.7
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 7.8e-134 481.1 345 67.8
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 7.8e-134 481.1 383 66.1
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.0e-133 480.7 303 74.9
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 1.7e-133 479.9 380 65.0
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 3.0e-133 479.2 380 64.7
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 6.6e-133 478.0 380 64.7
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.1e-132 477.2 385 66.8
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.9e-132 476.5 381 64.8
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 5.6e-132 474.9 299 75.3
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 2.4e-130 469.5 390 61.5
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.2e-128 463.0 432 58.6
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 4.9e-128 461.8 382 62.8
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 6.4e-128 461.5 393 65.1
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 1.1e-127 460.7 460 55.2
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 1.4e-127 460.3 302 71.5
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 7.9e-126 454.5 283 75.3
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.5e-124 449.5 296 73.3
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 9.0e-122 441.0 386 60.4
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.5e-121 440.3 395 59.0
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 2.6e-121 439.5 491 53.2
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 1.7e-120 436.8 384 57.8
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 6.4e-120 434.9 425 56.0
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.5e-118 429.1 275 73.8
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 5.1e-117 425.2 395 57.0
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.5e-116 422.9 395 57.0
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 4.8e-115 418.7 303 65.0
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.0e-114 415.6 381 57.5
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 5.3e-114 415.2 384 58.1
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 5.7e-108 395.2 354 58.5
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 2.6e-105 386.3 382 57.3
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 4.6e-102 375.6 293 61.4
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 4.3e-100 369.0 293 60.1
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 3.1e-98 362.8 328 54.0
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 4.1e-98 362.5 326 58.9
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 1.8e-93 347.1 296 55.4
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 6.9e-90 335.1 229 70.7
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.0e-88 331.3 250 64.4
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 8.5e-88 328.2 294 55.1
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 5.7e-84 315.5 213 71.4
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 5.7e-84 315.5 213 71.4
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 5.7e-84 315.5 213 71.4
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 1.3e-83 314.3 213 71.8
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 3.8e-80 302.8 289 48.4
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 2.0e-73 280.4 290 53.8
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 3.0e-69 266.5 285 46.7
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 4.0e-69 266.2 230 61.3
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.2e-68 264.6 304 44.4
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 6.5e-64 248.8 278 45.3
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 5.4e-58 229.2 177 66.1
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.9e-56 223.4 157 70.1
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 1.1e-47 194.9 135 72.6
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 6.0e-41 172.6 165 58.2
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.1e-38 164.1 111 66.7
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 2.0e-36 157.5 161 49.1
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 3.0e-32 143.7 97 70.1
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 9.9e-28 128.6 105 60.0
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.9e-27 127.1 166 44.6
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 2.3e-24 117.5 64 84.4
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.5e-23 114.0 97 55.7
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 4.0e-13 80.1 47 76.6
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 4.0e-13 80.1 47 76.6
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 3.5e-09 67.0 112 44.6
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 4.3e-07 60.1 41 68.3
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 1.6e-06 58.2 43 60.5


User provided reference genes

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