Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G080751 Glycine max HOM05D019450 ORTHO05D022766 1.1e-124 449.9 223 100.0
VMungo0720G2632 Vigna mungo HOM05D019450 ORTHO05D022766 3.7e-59 232.3 199 63.8
Glyma.10G080152 Glycine max HOM05D019450 ORTHO05D022766 5.6e-31 138.7 204 41.2
Glyma.10G080102 Glycine max HOM05D019450 ORTHO05D022766 1.3e-30 137.5 204 41.2
Glyma.10G080301 Glycine max HOM05D019450 ORTHO05D022766 4.0e-29 132.5 165 46.1
Phvul.007G268500 Phaseolus vulgaris HOM05D019450 ORTHO05D022766 3.8e-27 125.9 206 37.9
Prupe.7G097000 Prunus persica HOM05D002687 ORTHO05D002052 2.1e-17 93.6 221 32.6
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 2.5e-15 86.7 218 28.9
MD12G1038800 Malus domestica HOM05D002687 ORTHO05D002052 7.4e-15 85.1 222 30.2
Cpa.g.sc104.46 Carica papaya HOM05D002687 ORTHO05D002052 2.8e-14 83.2 211 31.3
MD03G1153500 Malus domestica HOM05D002687 ORTHO05D002052 8.1e-14 81.6 217 26.3
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.4e-13 80.1 221 28.5
CsaV3_6G038540 Cucumis sativus L. HOM05D002687 ORTHO05D002052 4.0e-13 79.3 211 29.4
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 9.0e-13 78.2 221 29.0
ClCG02G022410 Citrullus lanatus HOM05D002687 ORTHO05D002052 1.5e-12 77.4 211 28.4
RcHm_v2.0_Chr3g0475711 Rosa chinensis HOM05D002687 ORTHO05D002052 2.6e-12 76.6 207 28.0
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 3.4e-12 76.3 190 28.4
MELO3C014517.2 Cucumis melo HOM05D002687 ORTHO05D002052 4.5e-12 75.9 211 28.9
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 5.8e-12 75.5 222 27.9
Medtr7g106100 Medicago truncatula HOM05D002687 ORTHO05D002052 1.0e-11 74.7 179 28.5
TWI79G0900 Tripterygium wilfordii HOM05D002687 ORTHO05D002052 1.7e-11 73.9 238 25.6
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 2.9e-11 73.2 212 25.5
CSS0036580 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 4.9e-11 72.4 158 29.1
TPR.G35561 Trifolium pratense HOM05D002687 ORTHO05D002052 6.5e-11 72.0 165 29.7
Aqoxy1G00685 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 8.4e-11 71.6 205 21.5
Sc21g0006860 Simmondsia chinensis HOM05D002687 ORTHO05D002052 8.4e-11 71.6 171 26.9
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.4e-10 70.9 210 28.1
MD14G1037500 Malus domestica HOM05D002687 ORTHO05D002052 1.9e-10 70.5 217 27.6
Manes.09G046600 Manihot esculenta HOM05D002687 ORTHO05D002052 3.2e-10 69.7 217 25.8
Medtr7g106120 Medicago truncatula HOM05D002687 ORTHO05D002052 9.3e-10 68.2 177 26.6
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.6e-09 67.4 168 29.2
TPR.G35570 Trifolium pratense HOM05D002687 ORTHO05D002052 2.1e-09 67.0 162 29.0
Ca_09051_v3 Cicer arietinum L. HOM05D008136 ORTHO05D002052 3.5e-09 66.2 166 29.5
FvH4_6g20177 Fragaria vesca HOM05D002687 ORTHO05D002052 6.0e-09 65.5 166 27.7
Sed0009075 Sechium edule HOM05D002687 ORTHO05D002052 6.0e-09 65.5 219 26.0
FvH4_2g25004 Fragaria vesca HOM05D031442 ORTHO05D045543 7.9e-09 65.1 215 27.4
Dinv31751 Davidia involucrata HOM05D002687 ORTHO05D002052 2.3e-08 63.5 124 33.9
Oeu009048.1 Olea europaea HOM05D002687 ORTHO05D002052 3.0e-08 63.2 209 24.4
HanXRQChr14g0432161 Helianthus annuus HOM05D002687 ORTHO05D002052 5.1e-08 62.4 194 24.2
Aqoxy1G00677 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 8.7e-08 61.6 205 23.4
TAR636G0890 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.7e-08 61.6 182 26.9
ECA232G0334 Erigeron canadensis HOM05D002137 ORTHO05D002144 1.1e-07 61.2 226 23.5
FAN14G3199 Fragaria x ananassa HOM05D029328 ORTHO05D002052 1.5e-07 60.8 155 27.7
Ciclev10029176m.g Citrus clementina HOM05D002687 ORTHO05D002052 2.5e-07 60.1 185 24.9
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 3.3e-07 59.7 221 24.9
Dinv37912 Davidia involucrata HOM05D002137 ORTHO05D002144 5.7e-07 58.9 173 24.3
Aa31LG5G8690 Aethionema arabicum HOM05D002687 ORTHO05D002052 9.6e-07 58.2 205 22.4
Ciclev10012623m.g Citrus clementina HOM05D002687 ORTHO05D002052 9.6e-07 58.2 213 23.5
CiPaw.04G111600 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.3e-06 57.8 210 26.7
FAN09G1325 Fragaria x ananassa HOM05D002137 ORTHO05D002144 1.3e-06 57.8 168 26.2
Aqoxy1G00678 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 2.1e-06 57.0 223 23.3
Medtr2g011350 Medicago truncatula HOM05D000980 ORTHO05D000649 2.8e-06 56.6 194 22.7
Thecc.06G113200 Theobroma cacao HOM05D002137 ORTHO05D002144 2.8e-06 56.6 172 24.4
QL07p036916 Quercus lobata HOM05D008136 ORTHO05D002052 3.7e-06 56.2 211 24.6
Manes.11G153200 Manihot esculenta HOM05D000980 ORTHO05D000649 4.8e-06 55.8 180 24.4
TPR.G35573 Trifolium pratense HOM05D002687 ORTHO05D002052 6.3e-06 55.5 128 28.1


User provided reference genes

Program Settings