Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 6.2e-214 747.3 402 100.0
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 9.7e-183 643.7 412 87.1
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 5.6e-146 521.5 408 75.2
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 4.6e-84 315.8 410 52.0
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 2.3e-83 313.5 411 52.1
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 7.2e-77 292.0 401 54.1
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 4.1e-72 276.2 251 63.3
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 3.7e-65 253.1 428 45.8
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 6.9e-64 248.8 418 42.6
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.5e-63 247.7 432 42.8
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 2.5e-61 240.4 454 41.9
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 3.6e-60 236.5 229 60.7
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 1.4e-59 234.6 426 41.8
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 2.6e-58 230.3 450 40.0
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 4.4e-58 229.6 427 41.2
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 1.1e-56 224.9 417 42.0
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 7.0e-56 222.2 422 42.9
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 5.0e-54 216.1 414 40.3
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 1.5e-53 214.5 425 39.1
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.2e-52 211.5 458 38.4
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 2.1e-52 210.7 417 41.5
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 3.6e-52 209.9 425 39.3
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 6.1e-52 209.1 287 48.4
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 1.8e-51 207.6 449 35.9
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 1.8e-51 207.6 408 42.2
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 3.0e-51 206.8 421 40.9
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 8.8e-51 205.3 421 38.0
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 1.2e-50 204.9 458 37.8
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 2.0e-50 204.1 495 36.0
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.4e-50 203.0 303 44.2
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 2.2e-49 200.7 416 42.5
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 3.7e-49 199.9 386 44.0
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 4.8e-49 199.5 432 41.2
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.8e-48 197.6 417 42.4
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 2.0e-47 194.1 421 39.0
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 7.7e-47 192.2 405 39.3
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-46 191.8 393 43.8
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 2.9e-46 190.3 383 41.8
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 8.5e-46 188.7 433 39.5
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 1.1e-45 188.3 418 39.0
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 7.2e-45 185.7 453 36.2
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 9.4e-45 185.3 469 33.5
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 9.4e-45 185.3 470 35.1
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 9.4e-45 185.3 308 42.2
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 2.7e-44 183.7 397 38.8
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.8e-43 181.0 437 36.6
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 5.2e-43 179.5 442 39.6
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 6.8e-43 179.1 314 40.4
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.5e-42 177.9 390 41.8
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.6e-42 177.2 419 38.9
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 4.4e-42 176.4 460 36.5
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 5.7e-42 176.0 419 38.9
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 7.5e-42 175.6 373 38.9
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 9.8e-42 175.3 308 40.9
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.2e-41 174.1 428 38.6
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 4.8e-41 172.9 403 41.7
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 6.3e-41 172.6 380 37.1
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 8.3e-41 172.2 433 38.8
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 8.3e-41 172.2 398 41.0
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 8.3e-41 172.2 487 35.3
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 2.4e-40 170.6 409 35.5
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-39 167.5 422 39.3
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.7e-39 167.2 367 39.5
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 2.7e-39 167.2 435 34.7
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.0e-38 165.2 368 39.1
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 1.7e-38 164.5 401 36.2
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 1.1e-37 161.8 406 38.4
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 3.2e-37 160.2 265 42.6
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 5.5e-37 159.5 370 40.8
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 9.5e-37 158.7 428 39.7
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 2.8e-36 157.1 418 37.8
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 5.2e-35 152.9 420 35.5
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.2e-34 151.8 424 36.6
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 1.5e-34 151.4 424 35.6
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 2.6e-34 150.6 420 37.4
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 3.4e-34 150.2 422 33.4
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 9.8e-34 148.7 252 48.8
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 1.7e-33 147.9 418 36.1
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 2.8e-33 147.1 367 37.1
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 3.7e-33 146.7 258 41.9
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 8.3e-33 145.6 420 35.0
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 7.8e-31 139.0 422 37.0
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.7e-30 137.9 419 33.4
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 4.3e-29 133.3 226 45.6
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 2.8e-28 130.6 277 39.7
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 3.6e-28 130.2 300 37.3
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 2.6e-26 124.0 381 34.1
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 9.8e-26 122.1 312 35.3
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 5.4e-24 116.3 389 31.4
VMungo0720G3136 Vigna mungo HOM05D007360 ORTHO05D008235 5.4e-24 116.3 129 58.1
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 8.6e-22 109.0 309 33.0
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 1.1e-21 108.6 337 33.2
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 3.2e-16 90.5 272 32.4
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 3.9e-14 83.6 110 49.1
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 5.2e-11 73.2 64 62.5
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 1.7e-09 68.2 125 38.4
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 2.4e-08 64.3 79 44.3
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 2.3e-06 57.8 108 38.0


User provided reference genes

Program Settings