Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.5e-33 145.6 72 100.0
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 3.3e-33 144.4 72 98.6
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.0e-31 136.3 72 91.7
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.0e-31 136.3 72 91.7
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.8e-30 133.7 72 87.5
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.0e-29 132.9 72 88.9
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.7e-29 132.1 72 87.5
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 2.2e-29 131.7 72 88.9
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 3.8e-29 131.0 72 84.7
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 4.9e-29 130.6 72 84.7
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 4.6e-27 124.0 69 85.5
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 6.0e-27 123.6 72 84.7
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 83.3
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.3e-26 121.7 72 80.6
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 79.2
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 5.1e-26 120.6 85 71.8
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 5.1e-26 120.6 69 81.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 80.6
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 5.1e-26 120.6 68 83.8
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 79.2
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 77.8
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 79.2
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 6.7e-26 120.2 71 77.5
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 80.6
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 80.6
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 80.6
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 80.6
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 77.8
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 79.2
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 80.6
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 79.2
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.5e-25 119.0 69 78.3
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 76.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 76.4
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 79.2
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 79.2
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 79.2
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 3.3e-25 117.9 71 81.7
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 80.6
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 79.2
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 76.4
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 76.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 5.7e-25 117.1 71 80.3
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.3e-24 115.9 69 78.3
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.6e-24 115.5 69 78.3
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.6e-24 115.5 70 78.6
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 77.8
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.1e-24 115.2 71 76.1
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 73.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 73.6
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 80.6
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 8.2e-24 113.2 68 73.5
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 76.5
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 76.5
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 76.5
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 75.0
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.4e-23 112.5 68 76.5
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.8e-23 112.1 68 75.0
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.8e-23 112.1 68 75.0
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.8e-23 112.1 68 75.0
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.8e-23 112.1 69 71.0
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 2.4e-23 111.7 72 73.6
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 5.3e-23 110.5 66 75.8
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 6.9e-23 110.2 82 68.3
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 9.0e-23 109.8 70 74.3
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 9.0e-23 109.8 131 51.1
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.0e-22 108.6 67 74.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 2.0e-22 108.6 72 73.6
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 2.0e-22 108.6 72 73.6
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 3.4e-22 107.8 69 76.8
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 4.5e-22 107.5 68 72.1
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 4.5e-22 107.5 71 73.2
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 4.5e-22 107.5 75 72.0
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.8e-22 107.1 78 70.5
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.0e-21 106.3 68 70.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.3e-21 105.9 70 68.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 3.8e-21 104.4 72 66.7
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 6.5e-21 103.6 69 68.1
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.1e-20 102.8 65 70.8
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 5.5e-20 100.5 72 66.7
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.2e-19 99.4 59 76.3
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.2e-19 99.4 101 54.5
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.5e-17 92.4 62 67.7
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 3.3e-17 91.3 72 68.1
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 4.3e-17 90.9 62 69.4
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 7.4e-17 90.1 137 41.6
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.8e-16 88.2 52 82.7
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 6.3e-16 87.0 69 66.7
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 6.9e-15 83.6 50 80.0
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 9.0e-15 83.2 51 72.5
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 5.0e-13 77.4 42 88.1
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.9e-12 75.5 166 33.7
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 3.2e-12 74.7 68 55.9
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 9.4e-12 73.2 40 85.0
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.1e-11 70.5 42 78.6
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.4e-10 69.3 60 56.7
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 3.0e-10 68.2 42 76.2
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 3.0e-10 68.2 52 59.6
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.0e-10 68.2 39 76.9
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 3.9e-10 67.8 41 78.0
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 6.7e-10 67.0 42 73.8
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.0e-09 65.5 42 73.8
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 5.7e-09 63.9 35 80.0
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 7.4e-09 63.5 39 74.4
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 6.3e-08 60.5 36 75.0
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 6.3e-08 60.5 41 68.3
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.8e-07 58.9 35 74.3
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 5.3e-07 57.4 31 83.9
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 5.3e-07 57.4 66 45.5
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 9.1e-07 56.6 40 60.0
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 1.5e-06 55.8 30 83.3
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 4.5e-06 54.3 37 62.2
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 5.9e-06 53.9 30 80.0
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 7.7e-06 53.5 29 86.2
MCO13G197 Micromonas commoda HOM05D055842 ORTHO05D008361 7.7e-06 53.5 65 46.2


User provided reference genes

Program Settings