Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 1.3e-287 992.3 483 100.0
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.4e-284 982.2 483 98.8
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 4.0e-276 954.1 484 95.0
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 4.0e-276 954.1 484 95.0
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 9.9e-275 949.5 484 94.8
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 1.3e-274 949.1 492 93.7
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 3.8e-274 947.6 484 94.8
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 6.4e-274 946.8 484 94.4
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 1.9e-273 945.3 484 94.6
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 3.2e-273 944.5 483 94.6
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 5.1e-271 937.2 482 94.2
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 7.4e-270 933.3 484 93.0
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 4.8e-269 930.6 484 92.8
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 4.0e-268 927.5 484 91.9
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.0e-267 925.2 484 91.5
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.6e-267 924.9 484 91.5
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 7.6e-267 923.3 484 90.5
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 3.8e-266 921.0 476 92.2
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 3.8e-266 921.0 484 90.9
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 4.9e-266 920.6 484 91.3
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 4.9e-266 920.6 481 91.5
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 6.4e-266 920.2 484 91.1
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 6.4e-266 920.2 484 91.3
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.1e-265 919.5 484 91.1
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.4e-265 919.1 484 89.9
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.9e-265 918.7 484 90.9
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.4e-265 918.3 484 91.1
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 4.2e-265 917.5 484 90.9
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 5.5e-265 917.1 484 90.5
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.2e-264 916.0 481 91.7
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.2e-264 916.0 484 91.1
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 1.6e-264 915.6 484 90.9
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.6e-264 915.6 484 90.9
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 2.7e-264 914.8 483 90.9
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 2.7e-264 914.8 484 90.1
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 2.7e-264 914.8 489 90.6
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 3.5e-264 914.4 483 90.9
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 4.6e-264 914.1 483 90.7
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 4.6e-264 914.1 484 90.1
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 4.6e-264 914.1 484 90.5
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 7.9e-264 913.3 482 91.3
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 7.9e-264 913.3 484 90.7
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.0e-263 912.9 482 91.1
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 1.3e-263 912.5 484 90.5
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 1.8e-263 912.1 481 91.1
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 2.3e-263 911.8 481 91.3
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 3.9e-263 911.0 483 90.1
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 6.7e-263 910.2 485 90.9
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 6.7e-263 910.2 476 92.2
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 6.7e-263 910.2 484 90.1
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.1e-262 909.4 484 90.1
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 3.3e-262 907.9 481 90.4
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 5.6e-262 907.1 484 90.7
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 5.6e-262 907.1 481 91.3
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 9.6e-262 906.4 478 91.0
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 1.3e-261 906.0 481 90.4
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 1.3e-261 906.0 481 90.4
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.8e-261 904.8 480 91.5
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 4.8e-261 904.0 484 89.3
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 6.2e-261 903.7 484 90.3
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 6.2e-261 903.7 484 90.5
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 6.2e-261 903.7 484 90.3
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 8.2e-261 903.3 482 90.2
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 8.2e-261 903.3 481 90.6
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 1.1e-260 902.9 480 90.2
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.1e-260 902.9 480 90.6
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 1.4e-260 902.5 484 90.3
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 1.4e-260 902.5 481 90.6
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 1.8e-260 902.1 484 90.3
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.8e-260 902.1 484 90.3
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 1.8e-260 902.1 453 94.5
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 2.4e-260 901.7 484 90.3
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 2.4e-260 901.7 484 90.1
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 2.4e-260 901.7 474 91.1
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.4e-260 901.7 480 90.6
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 3.1e-260 901.4 484 90.3
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 4.0e-260 901.0 477 90.1
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 5.3e-260 900.6 484 90.3
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 5.3e-260 900.6 484 89.3
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 9.0e-260 899.8 483 90.3
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 1.2e-259 899.4 481 90.2
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.5e-259 899.0 484 89.9
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.4e-259 897.9 484 89.5
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 3.4e-259 897.9 484 90.1
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 3.4e-259 897.9 481 90.0
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 3.4e-259 897.9 484 89.7
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 4.5e-259 897.5 484 89.9
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 3.8e-258 894.4 485 89.9
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 4.9e-258 894.0 486 89.7
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 6.5e-258 893.6 477 89.3
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 8.4e-258 893.3 481 89.2
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 1.4e-257 892.5 486 87.9
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.9e-257 892.1 478 88.7
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 2.5e-257 891.7 475 90.9
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 5.5e-257 890.6 484 89.3
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 7.1e-257 890.2 481 88.4
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 1.6e-256 889.0 481 89.6
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 3.5e-256 887.9 481 88.6
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 6.0e-256 887.1 458 93.0
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 7.9e-256 886.7 456 92.5
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 3.9e-255 884.4 456 92.3
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 6.7e-255 883.6 460 92.0
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 8.7e-255 883.2 460 92.0
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 2.5e-254 881.7 480 88.3
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 5.7e-254 880.6 480 88.1
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.6e-253 879.0 479 88.7
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 2.6e-251 871.7 456 91.2
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 7.2e-249 863.6 478 87.2
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 9.3e-249 863.2 451 90.5
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.9e-246 855.5 477 86.4
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.8e-245 851.7 445 91.0
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 5.3e-244 847.4 488 83.8
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 1.5e-243 845.9 480 84.0
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 1.4e-241 839.3 475 83.6
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 1.4e-239 832.8 434 88.5
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 1.4e-239 832.8 431 88.6
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.5e-238 829.3 406 96.1
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 6.3e-237 823.9 408 94.1
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 5.3e-236 820.8 406 94.1
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.5e-235 819.3 405 94.1
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.7e-234 815.8 404 94.3
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 2.8e-229 798.5 433 85.7
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 4.0e-223 778.1 381 95.3
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 5.2e-223 777.7 478 79.7
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 3.7e-221 771.5 420 83.1
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 9.1e-220 766.9 427 82.2
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 3.5e-219 765.0 436 80.7
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 6.8e-215 750.7 392 90.6
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.3e-210 736.5 476 77.3
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 5.0e-210 734.6 390 91.3
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.3e-191 672.5 346 91.9
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.9e-188 662.9 365 87.4
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 3.4e-182 642.1 395 73.4
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.9e-181 638.3 482 69.5
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 8.1e-176 620.9 313 92.3
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.9e-174 614.0 484 67.6
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-173 613.6 482 67.6
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.2e-172 607.4 482 67.4
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 2.2e-165 586.3 331 86.7
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.8e-149 532.3 279 90.0
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.8e-141 505.8 351 72.1
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.1e-124 451.1 275 74.2
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 8.8e-114 414.8 203 96.1
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.4e-97 359.8 180 91.1
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.2e-96 357.1 191 86.4
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.0e-90 338.2 170 92.4
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 4.4e-89 332.8 171 88.9
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 3.9e-85 319.7 481 42.8
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.4e-74 284.6 146 88.4
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 2.3e-69 267.3 146 87.7
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 6.2e-67 259.2 143 90.9
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 1.4e-63 248.1 125 93.6
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 7.1e-63 245.7 127 85.0
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 6.8e-58 229.2 144 82.6
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.2e-55 219.9 284 41.9
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 5.6e-52 209.5 100 96.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.2e-51 206.1 102 95.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.1e-50 203.8 124 83.9
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 3.0e-37 160.6 105 74.3
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 4.0e-34 150.2 109 71.6
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 4.0e-34 150.2 77 92.2
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 4.0e-34 150.2 77 92.2
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 3.0e-29 134.0 156 45.5
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 1.1e-28 132.1 69 92.8
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.3e-28 130.6 69 88.4
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.7e-28 129.8 70 87.1
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.8e-26 124.8 65 89.2
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.8e-26 124.8 65 89.2
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.2e-25 122.1 66 86.4
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.6e-25 120.9 66 84.8
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.6e-22 110.2 68 76.5
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 5.1e-21 106.7 67 68.7
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 3.3e-20 104.0 47 97.9
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.2e-17 95.5 48 91.7
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 7.2e-15 86.3 168 35.1
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 3.3e-12 77.4 71 52.1
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 2.8e-11 74.3 72 51.4
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 6.3e-11 73.2 72 51.4
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.4e-10 71.2 59 79.7
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 1.3e-08 65.5 61 52.5
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 5.5e-07 60.1 59 61.0
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 7.9e-06 56.2 38 68.4


User provided reference genes

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