Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 1.1e-121 439.9 209 100.0
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 4.8e-93 344.7 210 79.5
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.0e-90 337.0 212 78.3
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 7.2e-89 330.9 215 74.9
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 2.1e-88 329.3 215 75.3
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 5.2e-87 324.7 215 74.0
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 1.0e-82 310.5 216 69.9
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 1.8e-79 299.7 209 72.7
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 2.6e-78 295.8 215 70.2
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 5.7e-78 294.7 181 73.5
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 3.7e-77 292.0 213 71.4
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.0e-75 286.2 223 65.9
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 4.5e-75 285.0 222 64.4
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 7.8e-75 284.3 180 71.1
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.7e-74 283.1 224 63.8
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 2.3e-74 282.7 224 65.6
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.3e-74 282.7 224 65.6
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 8.6e-74 280.8 185 71.4
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.5e-73 280.0 182 72.0
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 1.9e-73 279.6 182 72.0
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 3.3e-73 278.9 211 64.5
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 9.5e-73 277.3 225 62.2
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.2e-72 276.9 182 71.4
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 2.1e-72 276.2 173 74.6
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.8e-71 273.1 222 61.7
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 1.8e-71 273.1 213 63.4
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.3e-71 272.7 172 72.7
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.3e-71 272.7 172 72.7
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 6.8e-71 271.2 228 60.5
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 8.9e-71 270.8 163 74.2
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 1.5e-70 270.0 192 66.1
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 4.4e-70 268.5 166 74.7
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 9.8e-70 267.3 199 63.8
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.3e-69 266.9 176 70.5
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.3e-69 266.9 167 72.5
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 1.3e-69 266.9 216 63.4
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 1.7e-69 266.5 172 72.7
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 2.2e-69 266.2 217 62.2
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 2.9e-69 265.8 125 95.2
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 2.9e-69 265.8 164 73.2
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 2.9e-69 265.8 174 71.8
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 2.9e-69 265.8 213 62.0
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 4.9e-69 265.0 197 63.5
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.4e-68 263.5 222 57.7
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 2.4e-68 262.7 199 62.8
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 3.2e-68 262.3 187 65.2
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 4.1e-68 261.9 199 63.3
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 4.1e-68 261.9 165 71.5
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 1.2e-67 260.4 196 62.2
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 1.2e-67 260.4 177 67.2
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.2e-67 260.4 176 67.6
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 3.5e-67 258.8 165 70.3
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 4.6e-67 258.5 190 65.8
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 6.0e-67 258.1 165 70.9
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 6.0e-67 258.1 190 65.3
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 3.9e-66 255.4 207 59.9
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 5.0e-66 255.0 177 68.4
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 5.0e-66 255.0 166 68.7
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 5.0e-66 255.0 167 70.7
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 1.1e-65 253.8 166 68.7
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 1.1e-65 253.8 203 61.6
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.5e-65 253.4 202 60.4
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.5e-65 252.7 172 66.3
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 3.3e-65 252.3 166 68.1
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 3.3e-65 252.3 166 68.1
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 3.3e-65 252.3 166 68.1
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 3.3e-65 252.3 166 68.1
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 3.3e-65 252.3 166 68.1
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 9.5e-65 250.8 190 59.5
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.6e-64 250.0 210 63.8
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 2.8e-64 249.2 191 61.8
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 1.1e-63 247.3 221 57.9
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 3.1e-63 245.7 166 65.1
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 5.2e-63 245.0 230 56.1
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 6.8e-63 244.6 159 68.6
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.2e-62 243.8 166 66.9
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.3e-61 240.4 166 66.3
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 2.2e-61 239.6 227 52.4
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 2.9e-61 239.2 215 55.8
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.4e-60 236.9 150 70.7
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 3.2e-60 235.7 166 64.5
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.6e-59 233.4 324 43.2
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 3.5e-59 232.3 160 65.6
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 8.6e-58 227.6 110 95.5
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 1.5e-57 226.9 140 72.9
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 5.6e-57 224.9 176 60.2
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 4.7e-56 221.9 181 56.9
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.4e-52 210.3 173 59.0
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.2e-51 207.2 192 56.2
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.1e-47 194.1 106 83.0
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.5e-46 190.3 106 82.1
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 7.6e-46 188.0 119 73.1
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 1.4e-44 183.7 137 67.9
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 5.3e-39 165.2 147 55.8
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 4.3e-33 145.6 214 43.9
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.1e-25 120.9 79 70.9
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 4.8e-24 115.5 128 48.4
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 2.4e-23 113.2 88 56.8
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 3.1e-23 112.8 117 47.0
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 4.2e-20 102.4 136 41.2
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 3.3e-17 92.8 118 39.8
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 5.7e-17 92.0 156 37.8
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 2.9e-13 79.7 122 37.7
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 4.6e-11 72.4 43 79.1


User provided reference genes

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