Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 5.8e-261 903.7 446 100.0
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 6.7e-209 730.7 402 88.1
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 1.2e-197 693.3 424 81.4
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 6.7e-185 651.0 406 79.6
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 4.5e-181 638.3 423 76.8
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.3e-180 636.7 406 78.6
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 8.5e-180 634.0 414 77.1
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 1.1e-179 633.6 408 77.7
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 5.3e-174 614.8 406 75.6
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.6e-173 613.2 406 76.1
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 4.5e-173 611.7 397 76.8
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 8.9e-161 570.9 409 70.7
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 3.1e-158 562.4 408 68.9
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 4.5e-157 558.5 408 69.1
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 5.9e-157 558.1 405 69.1
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 5.9e-157 558.1 407 68.3
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 7.8e-157 557.8 406 69.2
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 2.9e-156 555.8 405 68.9
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 6.6e-156 554.7 408 67.9
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.2e-154 550.4 409 68.0
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 1.6e-154 550.1 408 67.4
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 8.9e-153 544.3 414 67.4
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 8.9e-153 544.3 407 66.8
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 8.9e-153 544.3 404 67.1
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.2e-152 543.9 403 68.7
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 4.4e-152 542.0 405 66.4
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 5.8e-152 541.6 412 66.0
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.3e-151 540.4 405 67.7
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 2.2e-151 539.7 408 66.4
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 2.9e-151 539.3 403 70.7
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 3.7e-151 538.9 409 67.0
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 6.4e-151 538.1 408 66.4
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.4e-150 537.0 409 66.7
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.4e-150 537.0 408 65.9
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.9e-150 536.6 405 66.9
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.4e-150 536.2 408 65.7
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 9.2e-150 534.3 409 66.3
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 2.7e-149 532.7 408 65.7
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.5e-149 532.3 404 66.1
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 4.6e-149 531.9 428 63.1
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 1.0e-148 530.8 407 66.3
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 1.7e-148 530.0 410 65.6
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.0e-148 528.5 408 64.7
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 5.0e-148 528.5 409 65.0
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 8.6e-148 527.7 411 64.5
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 2.5e-147 526.2 401 68.1
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 2.5e-147 526.2 411 65.9
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 5.6e-147 525.0 405 63.2
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 5.6e-147 525.0 407 63.6
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 2.8e-146 522.7 410 64.6
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 4.7e-146 521.9 408 63.5
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 4.7e-146 521.9 401 68.6
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 8.0e-146 521.2 428 63.1
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 1.1e-145 520.8 405 63.0
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 1.8e-145 520.0 407 63.6
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.8e-145 520.0 408 64.2
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 1.8e-145 520.0 410 64.6
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 6.8e-145 518.1 408 63.0
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 8.9e-145 517.7 398 67.3
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 1.2e-144 517.3 409 63.6
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 2.0e-144 516.5 410 63.4
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 2.6e-144 516.2 398 63.6
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 5.8e-144 515.0 456 58.8
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 2.2e-143 513.1 412 63.3
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 2.9e-143 512.7 398 66.6
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 3.7e-143 512.3 414 61.8
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 4.9e-143 511.9 410 64.1
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 4.9e-143 511.9 408 62.7
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 6.4e-143 511.5 406 63.5
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 1.9e-142 510.0 419 61.6
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 1.9e-142 510.0 403 62.5
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 7.0e-142 508.1 422 60.7
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 7.8e-141 504.6 405 62.5
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 1.0e-140 504.2 411 61.1
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.3e-140 503.8 411 62.3
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.7e-140 503.4 406 62.3
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 1.7e-140 503.4 407 62.7
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.7e-140 503.4 457 57.8
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 2.3e-140 503.1 409 62.1
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 3.0e-140 502.7 406 62.6
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 3.0e-140 502.7 406 62.6
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 3.9e-140 502.3 407 62.2
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 6.6e-140 501.5 522 53.3
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 2.5e-139 499.6 406 61.8
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 7.3e-139 498.0 405 61.5
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 1.6e-138 496.9 414 60.9
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.1e-138 496.5 401 65.1
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 3.1e-137 492.7 391 66.2
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 4.0e-137 492.3 411 61.6
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 1.1e-134 484.2 404 65.1
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 4.1e-134 482.3 348 69.3
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 5.1e-132 475.3 403 60.0
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 8.6e-132 474.6 437 57.0
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 8.6e-132 474.6 437 57.0
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 1.5e-131 473.8 367 64.3
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.1e-130 469.9 404 59.7
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 5.2e-129 465.3 408 60.3
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 6.4e-127 458.4 408 61.5
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 3.2e-126 456.1 402 58.2
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 2.7e-125 453.0 400 57.8
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 3.5e-125 452.6 394 61.4
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 4.6e-125 452.2 402 59.0
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.9e-124 449.1 401 58.6
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 1.9e-123 446.8 413 56.4
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 2.5e-123 446.4 368 61.1
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 4.3e-123 445.7 405 57.0
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 9.6e-123 444.5 375 63.2
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 9.6e-123 444.5 375 63.2
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 2.1e-122 443.4 375 62.9
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 1.1e-121 441.0 387 57.4
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 2.4e-121 439.9 410 56.6
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 3.2e-118 429.5 399 55.9
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 1.6e-117 427.2 336 63.7
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 2.1e-117 426.8 395 55.7
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.3e-116 424.1 360 63.6
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 7.3e-115 418.3 369 58.8
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 1.6e-114 417.2 403 54.3
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 4.0e-113 412.5 384 55.7
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.2e-112 411.0 341 63.6
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 7.6e-112 408.3 403 54.3
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 6.4e-111 405.2 322 62.1
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.4e-110 404.1 402 53.7
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 1.4e-110 404.1 383 55.1
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 5.4e-110 402.1 402 53.7
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.6e-106 390.6 343 62.7
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 4.8e-106 389.0 330 59.7
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 1.3e-103 380.9 360 54.2
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 4.9e-103 379.0 400 50.0
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 4.9e-103 379.0 399 50.6
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 4.2e-102 375.9 416 49.5
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 1.2e-101 374.4 323 57.9
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 1.3e-100 370.9 399 49.4
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 3.3e-99 366.3 410 50.7
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 9.6e-99 364.8 394 49.0
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 6.2e-98 362.1 254 67.3
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 3.9e-92 342.8 263 65.4
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 6.7e-92 342.0 274 62.8
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 4.1e-89 332.8 395 45.1
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 7.7e-88 328.6 262 62.2
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 7.9e-85 318.5 393 46.3
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.4e-84 317.8 257 61.5
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.1e-83 314.7 278 57.2
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 2.5e-83 313.5 407 43.0
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 3.1e-81 306.6 400 43.2
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.6e-80 303.5 228 64.5
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.5e-79 298.9 257 55.6
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 4.7e-77 292.7 266 56.4
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 2.3e-68 263.8 367 44.1
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 2.0e-67 260.8 279 50.9
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.5e-62 244.6 194 61.9
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.8e-57 227.6 431 35.5
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.8e-57 227.6 158 65.8
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 7.0e-41 172.6 151 61.6
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 2.7e-40 170.6 362 34.5
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 1.3e-39 168.3 454 29.5
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 5.6e-38 162.9 137 63.5
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 9.5e-38 162.2 125 68.0
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.3e-31 141.7 140 55.7
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.9e-31 140.2 99 61.6
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 3.6e-29 133.7 329 28.0
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 8.1e-29 132.5 375 30.4
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.4e-28 131.7 226 37.6
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 1.5e-27 128.3 227 38.3
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 1.1e-20 105.5 135 42.2
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 1.8e-20 104.8 68 75.0
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 6.4e-18 96.3 101 52.5
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.1e-17 95.5 124 50.0
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.1e-12 79.0 55 65.5
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 8.4e-10 69.3 60 60.0
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.4e-09 68.6 64 56.2
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 9.3e-09 65.9 44 75.0
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 2.7e-08 64.3 65 50.8
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 2.3e-07 61.2 135 33.3


User provided reference genes

Program Settings