Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 3.8e-285 984.2 511 100.0
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 3.7e-264 914.4 543 89.5
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 2.5e-244 848.6 542 82.5
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 2.4e-242 842.0 543 82.1
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 4.2e-223 778.1 542 75.8
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 2.3e-221 772.3 545 75.0
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 1.5e-217 759.6 541 74.9
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 6.1e-214 747.7 539 72.2
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 2.3e-213 745.7 543 72.0
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 5.7e-212 741.1 530 74.5
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 2.9e-208 728.8 547 71.5
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 6.5e-208 727.6 547 71.1
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 1.5e-196 689.9 541 69.5
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 8.5e-192 674.1 541 64.3
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 1.8e-189 666.4 541 64.3
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 2.0e-188 662.9 541 64.1
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 2.2e-187 659.4 541 63.4
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 3.2e-183 645.6 543 63.4
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 3.2e-183 645.6 543 63.4
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 1.1e-178 630.6 544 62.3
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 1.4e-178 630.2 544 60.7
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.1e-178 629.0 540 60.9
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 2.0e-177 626.3 542 62.2
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.0e-176 624.0 541 61.6
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 1.1e-175 620.5 544 59.7
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 9.5e-175 617.5 544 60.8
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 3.6e-174 615.5 544 61.8
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 5.2e-173 611.7 541 59.1
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 2.8e-171 605.9 543 59.5
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 6.3e-171 604.7 520 61.5
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 1.1e-170 604.0 541 58.8
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 1.4e-170 603.6 540 60.6
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 1.4e-170 603.6 520 61.2
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 7.0e-170 601.3 542 60.3
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 1.6e-169 600.1 543 57.5
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 1.3e-168 597.0 541 59.3
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 1.3e-168 597.0 519 61.1
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 5.0e-168 595.1 541 56.7
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 5.0e-168 595.1 541 60.3
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 1.9e-167 593.2 542 60.1
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 4.3e-167 592.0 543 57.8
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 1.4e-165 587.0 507 61.1
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 3.0e-165 585.9 549 56.8
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 5.2e-165 585.1 541 57.3
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 8.9e-165 584.3 549 56.6
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 8.9e-165 584.3 534 57.9
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 1.5e-164 583.6 541 58.6
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 1.3e-163 580.5 544 56.2
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 2.9e-163 579.3 543 57.6
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 1.8e-162 576.6 544 57.7
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 1.6e-161 573.5 541 55.3
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.5e-161 572.4 520 59.8
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.5e-161 572.4 520 59.6
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 5.9e-161 571.6 541 57.7
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.3e-160 569.7 520 59.4
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.0e-160 569.3 520 59.2
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.1e-159 567.4 520 59.2
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 5.6e-159 565.1 539 55.7
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 1.2e-158 563.9 541 56.4
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 4.7e-158 562.0 541 56.6
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 1.0e-157 560.8 541 56.4
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 1.5e-156 557.0 544 54.8
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.8e-156 555.1 521 58.5
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 6.4e-155 551.6 539 55.3
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 1.4e-154 550.4 545 54.9
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 1.9e-154 550.1 541 55.5
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 2.4e-154 549.7 541 54.3
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 1.2e-153 547.4 541 54.7
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 3.5e-153 545.8 541 54.3
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 4.6e-153 545.4 540 55.6
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 6.0e-153 545.0 541 54.3
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 1.3e-152 543.9 541 53.4
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 3.0e-152 542.7 545 54.9
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 3.9e-152 542.3 549 54.1
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 1.9e-151 540.0 528 55.5
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 2.3e-149 533.1 530 54.3
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 5.2e-149 531.9 528 54.9
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 2.0e-148 530.0 540 52.4
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 3.4e-148 529.3 544 51.7
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 8.3e-147 524.6 543 50.8
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 1.4e-146 523.9 543 50.8
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 3.2e-146 522.7 547 51.9
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 4.1e-146 522.3 544 51.8
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 3.5e-145 519.2 515 54.6
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 1.0e-144 517.7 544 50.4
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 1.7e-144 516.9 536 53.0
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 3.0e-144 516.2 544 50.6
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 3.0e-144 516.2 538 53.0
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 1.1e-143 514.2 544 50.2
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 1.1e-143 514.2 539 52.5
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 1.5e-143 513.8 544 50.2
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 1.8e-141 506.9 506 54.9
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 2.4e-138 496.5 503 52.3
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 2.4e-138 496.5 525 52.0
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 1.3e-136 490.7 544 49.1
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 1.3e-136 490.7 544 49.3
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 8.6e-136 488.0 536 51.3
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 1.9e-135 486.9 319 77.7
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 1.2e-132 477.6 552 49.5
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 3.4e-132 476.1 410 59.5
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 1.3e-131 474.2 552 48.9
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 3.1e-125 453.0 416 58.4
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 8.7e-120 434.9 424 59.0
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 9.9e-116 421.4 550 44.9
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 2.7e-113 413.3 358 59.2
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 4.6e-113 412.5 540 44.8
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 1.6e-110 404.1 426 51.6
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 8.2e-110 401.7 507 46.2
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 2.7e-105 386.7 421 51.1
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 1.9e-103 380.6 425 54.4
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 2.9e-99 366.7 354 55.6
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 1.9e-95 354.0 491 44.0
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 7.7e-92 342.0 572 36.0
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 2.3e-88 330.5 318 57.2
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 6.7e-88 328.9 275 65.1
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 1.5e-87 327.8 453 42.2
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 1.1e-82 311.6 348 51.4
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 3.1e-77 293.5 502 35.7
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 1.6e-76 291.2 533 35.6
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 2.2e-75 287.3 474 39.2
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 2.2e-75 287.3 474 38.8
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 2.7e-73 280.4 580 34.8
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 9.7e-71 271.9 239 64.4
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 6.3e-70 269.2 229 65.1
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.5e-66 258.1 265 51.7
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 2.5e-66 257.3 487 34.3
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 4.9e-46 189.9 120 78.3
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 3.6e-41 173.7 111 79.3
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 1.7e-35 154.8 165 55.2
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.0e-35 154.1 103 68.9
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.6e-33 147.1 239 38.1
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 2.0e-31 141.4 197 47.2
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.2e-30 137.9 102 62.7
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 2.9e-30 137.5 95 66.3
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 4.9e-30 136.7 116 58.6
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 8.3e-30 136.0 420 30.2
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 1.1e-26 125.6 88 71.6
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 4.7e-25 120.2 90 67.8
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 8.1e-25 119.4 114 51.8
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 3.1e-24 117.5 569 23.9
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 4.4e-15 87.0 338 25.1
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 1.3e-14 85.5 125 40.8
Thhalv10027287m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 7.1e-13 79.7 85 44.7
BcaC07g40074 Brassica carinata HOM05D001925 ORTHO05D005701 9.6e-10 69.3 85 50.6
C09p49930 Brassica napus HOM05D001925 ORTHO05D039571 1.3e-09 68.9 121 40.5
FAN22G1210 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.4e-08 65.5 62 56.5
A09p50030 Brassica napus HOM05D001925 ORTHO05D005701 9.9e-07 59.3 88 37.5


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