Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 5.7e-167 590.9 308 100.0
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 2.0e-156 555.8 308 93.8
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 3.0e-131 472.2 312 80.4
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 2.8e-129 465.7 313 82.1
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 3.7e-126 455.3 312 82.4
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.1e-120 437.2 312 75.6
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 7.1e-117 424.5 313 74.4
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 6.6e-115 417.9 314 72.9
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 6.2e-113 411.4 257 83.7
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 1.5e-111 406.8 327 70.9
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 9.9e-111 404.1 317 73.5
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 5.4e-109 398.3 263 77.9
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 1.2e-108 397.1 307 69.1
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 6.0e-108 394.8 313 69.6
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.7e-107 393.3 313 69.0
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 3.0e-107 392.5 310 68.1
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 3.9e-107 392.1 316 68.4
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 5.1e-107 391.7 313 68.7
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 2.1e-105 386.3 312 68.9
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 4.8e-105 385.2 311 66.9
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 8.1e-105 384.4 307 67.8
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 9.0e-104 380.9 311 65.6
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.5e-103 380.2 315 67.0
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 3.4e-103 379.0 300 69.0
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 4.9e-102 375.2 256 74.6
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 4.9e-102 375.2 283 67.1
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 1.1e-101 374.0 279 70.6
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.9e-101 373.2 235 80.9
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 2.4e-101 372.9 258 74.0
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 4.2e-101 372.1 337 63.5
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.6e-100 370.2 278 69.8
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 2.1e-100 369.8 277 71.8
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 3.5e-100 369.0 259 71.4
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 2.3e-99 366.3 259 72.6
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 3.9e-99 365.5 279 67.7
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 5.1e-99 365.2 305 65.6
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 8.7e-99 364.4 258 72.1
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 8.7e-99 364.4 310 64.5
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 1.5e-98 363.6 264 70.8
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.5e-98 363.6 279 67.4
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 3.3e-98 362.5 323 63.8
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 7.4e-98 361.3 260 71.2
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 1.6e-97 360.1 274 67.2
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 3.7e-97 359.0 255 71.0
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 4.8e-97 358.6 265 67.9
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 4.8e-97 358.6 268 68.3
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 6.2e-97 358.2 259 73.4
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 8.1e-97 357.8 258 70.2
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 8.1e-97 357.8 227 78.9
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 8.1e-97 357.8 269 68.8
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 1.1e-96 357.5 292 65.1
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 1.1e-96 357.5 280 65.7
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 1.8e-96 356.7 305 63.3
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 4.0e-96 355.5 273 67.4
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 5.3e-96 355.1 231 75.8
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 6.9e-96 354.8 265 67.5
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 9.0e-96 354.4 269 67.7
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.2e-95 354.0 261 70.1
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 2.6e-95 352.8 259 68.7
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 4.5e-95 352.1 269 67.7
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.3e-94 350.5 315 61.6
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.7e-94 350.1 273 66.7
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 2.2e-94 349.7 269 67.7
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 2.9e-94 349.4 274 70.8
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 1.1e-93 347.4 295 62.7
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.5e-93 345.1 282 66.3
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 7.1e-93 344.7 232 74.6
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 1.6e-92 343.6 279 63.4
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 2.7e-92 342.8 290 62.8
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 1.0e-91 340.9 292 63.4
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 3.0e-91 339.3 320 60.3
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 5.1e-91 338.6 225 77.8
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 1.9e-90 336.7 304 63.5
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 2.5e-90 336.3 271 65.3
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 5.6e-90 335.1 254 68.1
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 5.6e-90 335.1 271 64.9
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 5.6e-90 335.1 271 64.9
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 9.6e-90 334.3 259 67.6
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 9.6e-90 334.3 257 66.9
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.3e-89 334.0 244 68.9
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 2.8e-89 332.8 271 64.6
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 3.7e-89 332.4 307 61.2
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 6.2e-89 331.6 304 60.5
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 6.2e-89 331.6 263 66.5
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 1.1e-88 330.9 256 66.0
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 1.1e-88 330.9 228 74.6
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 5.8e-87 325.1 289 63.0
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.2e-86 323.2 248 66.5
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.2e-86 323.2 248 66.9
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 4.9e-86 322.0 261 65.1
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 8.4e-86 321.2 281 62.6
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 8.4e-86 321.2 273 60.8
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.4e-85 320.5 248 66.5
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.3e-83 313.9 233 68.2
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 3.3e-82 309.3 260 66.5
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 2.4e-80 303.1 240 67.9
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 4.1e-80 302.4 261 61.3
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.0e-78 297.7 263 61.6
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 3.6e-76 289.3 288 56.6
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 5.7e-74 282.0 278 52.5
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 9.7e-74 281.2 226 66.4
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 9.1e-72 274.6 217 67.3
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.3e-70 270.8 245 56.3
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 8.8e-67 258.1 281 54.4
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 5.7e-66 255.4 262 53.4
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 7.2e-61 238.4 245 54.7
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.7e-57 227.3 263 48.3
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.1e-53 214.5 195 57.4
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 2.7e-52 209.9 148 71.6
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 9.7e-50 201.4 221 50.7
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 4.7e-28 129.4 218 38.1
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 7.8e-23 112.1 122 53.3
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 5.0e-22 109.4 89 66.3
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 3.1e-19 100.1 225 31.1
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 1.6e-15 87.8 60 68.3
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 1.6e-15 87.8 60 68.3
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 1.8e-11 74.3 226 29.2


User provided reference genes

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