Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G243650 Glycine max HOM05D000132 ORTHO05D000058 6.1e-31 136.7 64 100.0
Phvul.008G047800 Phaseolus vulgaris HOM05D000132 ORTHO05D000058 2.3e-25 118.2 63 88.9
Glyma.18G249700 Glycine max HOM05D000132 ORTHO05D000058 3.4e-21 104.4 63 77.8
VMungo1383G1912 Vigna mungo HOM05D000132 ORTHO05D000058 2.2e-20 101.7 53 88.7
Lj1g0019982 Lotus japonicus HOM05D000132 ORTHO05D000058 9.5e-16 86.3 63 61.9
Lj1g0022073 Lotus japonicus HOM05D000132 ORTHO05D000058 8.9e-14 79.7 63 55.6
Lj1g0027072 Lotus japonicus HOM05D000132 ORTHO05D000058 1.5e-13 79.0 63 55.6
Glyma.09G243600 Glycine max HOM05D000132 ORTHO05D000058 4.1e-11 70.9 75 50.7
Medtr7g081570 Medicago truncatula HOM05D000132 ORTHO05D000058 9.2e-11 69.7 52 63.5
Glyma.18G249900 Glycine max HOM05D000132 ORTHO05D000058 1.6e-10 68.9 52 63.5
Glyma.18G250500 Glycine max HOM05D000132 ORTHO05D000058 3.5e-10 67.8 52 61.5
Medtr0365s0030 Medicago truncatula HOM05D000132 ORTHO05D000058 4.6e-10 67.4 56 55.4
Medtr0400s0040 Medicago truncatula HOM05D000132 ORTHO05D000058 4.6e-10 67.4 56 55.4
Medtr7g081780 Medicago truncatula HOM05D000132 ORTHO05D000058 6.0e-10 67.0 56 58.9
Medtr1g039310 Medicago truncatula HOM05D000132 ORTHO05D000058 1.0e-09 66.2 56 57.1
Phvul.008G146000 Phaseolus vulgaris HOM05D000132 ORTHO05D000058 1.3e-09 65.9 53 54.7
Ca_26229_v3 Cicer arietinum L. HOM05D000132 ORTHO05D000058 3.9e-09 64.3 53 54.7
Phvul.008G146600 Phaseolus vulgaris HOM05D000132 ORTHO05D000058 3.9e-09 64.3 54 55.6
Medtr1g040545 Medicago truncatula HOM05D000132 ORTHO05D000058 8.6e-09 63.2 54 55.6
Medtr1g040615 Medicago truncatula HOM05D000132 ORTHO05D000058 8.6e-09 63.2 54 55.6
Psat6g101200 Pisum sativum HOM05D000132 ORTHO05D000058 8.6e-09 63.2 59 55.9
Phvul.008G047600 Phaseolus vulgaris HOM05D000132 ORTHO05D000058 1.1e-08 62.8 38 71.1
arahy.Tifrunner.gnm1.ann1.KT5A6J Arachis hypogaea HOM05D000132 ORTHO05D000058 1.5e-08 62.4 57 54.4
Psat0s1268g0080 Pisum sativum HOM05D000132 ORTHO05D000058 1.5e-08 62.4 54 57.4
Psat6g101680 Pisum sativum HOM05D000132 ORTHO05D000058 1.5e-08 62.4 57 56.1
Medtr1g039090 Medicago truncatula HOM05D000132 ORTHO05D000058 1.9e-08 62.0 53 54.7
Psat0s3723g0080 Pisum sativum HOM05D000132 ORTHO05D000058 1.9e-08 62.0 65 49.2
arahy.Tifrunner.gnm1.ann1.PJC979 Arachis hypogaea HOM05D000132 ORTHO05D000058 2.5e-08 61.6 57 54.4
Medtr1g040555 Medicago truncatula HOM05D000132 ORTHO05D000058 2.5e-08 61.6 55 54.5
VMungo1383G0453 Vigna mungo HOM05D000132 ORTHO05D000058 2.5e-08 61.6 53 54.7
VMungo1383G1506 Vigna mungo HOM05D000132 ORTHO05D000058 2.5e-08 61.6 53 54.7
Glyma.16G064100 Glycine max HOM05D000132 ORTHO05D000058 3.3e-08 61.2 71 47.9
Glyma.16G064200 Glycine max HOM05D000132 ORTHO05D000058 3.3e-08 61.2 71 47.9
Medtr7g081720 Medicago truncatula HOM05D000132 ORTHO05D000058 3.3e-08 61.2 56 57.1
Psat0s1268g0120 Pisum sativum HOM05D000132 ORTHO05D000058 4.3e-08 60.8 56 57.1
Psat1g097400 Pisum sativum HOM05D000132 ORTHO05D000058 4.3e-08 60.8 57 54.4
TPR.G31916 Trifolium pratense HOM05D000132 ORTHO05D000058 4.3e-08 60.8 71 47.9
TPR.G38920 Trifolium pratense HOM05D000132 ORTHO05D000058 4.3e-08 60.8 54 57.4
arahy.Tifrunner.gnm1.ann1.KRE7U4 Arachis hypogaea HOM05D000132 ORTHO05D000058 5.6e-08 60.5 54 57.4
Medtr1g039240 Medicago truncatula HOM05D000132 ORTHO05D000058 7.3e-08 60.1 37 67.6
TPR.G38890 Trifolium pratense HOM05D000132 ORTHO05D000058 7.3e-08 60.1 54 59.3
Medtr1g039220 Medicago truncatula HOM05D000132 ORTHO05D000058 9.5e-08 59.7 53 58.5
TPR.G34243 Trifolium pratense HOM05D000132 ORTHO05D000058 9.5e-08 59.7 54 51.9
Glyma.19G081200 Glycine max HOM05D000132 ORTHO05D000058 1.2e-07 59.3 50 52.0
Medtr7g446190 Medicago truncatula HOM05D000132 ORTHO05D000058 1.2e-07 59.3 44 56.8
Medtr1g040525 Medicago truncatula HOM05D000132 ORTHO05D000058 1.6e-07 58.9 54 51.9
Dinv27399 Davidia involucrata HOM05D000132 ORTHO05D000058 2.1e-07 58.5 36 69.4
Medtr7g045860 Medicago truncatula HOM05D000132 ORTHO05D000058 2.1e-07 58.5 64 45.3
Glyma.16G064800 Glycine max HOM05D000132 ORTHO05D000058 2.8e-07 58.2 53 52.8
Glyma.18G199000 Glycine max HOM05D000132 ORTHO05D000058 2.8e-07 58.2 34 67.6
Glyma.16G065400 Glycine max HOM05D000132 ORTHO05D000058 3.6e-07 57.8 55 50.9
Glyma.16G065600 Glycine max HOM05D000132 ORTHO05D000058 3.6e-07 57.8 55 50.9
Glyma.18G250900 Glycine max HOM05D000132 ORTHO05D000058 3.6e-07 57.8 34 73.5
Medtr1g038890 Medicago truncatula HOM05D000132 ORTHO05D000058 3.6e-07 57.8 52 50.0
Medtr1g040575 Medicago truncatula HOM05D000132 ORTHO05D000058 3.6e-07 57.8 48 54.2
Glyma.16G064900 Glycine max HOM05D000132 ORTHO05D000058 4.7e-07 57.4 55 50.9
Glyma.16G065200 Glycine max HOM05D000132 ORTHO05D000058 4.7e-07 57.4 55 50.9
Glyma.U031127 Glycine max HOM05D000132 ORTHO05D000058 4.7e-07 57.4 55 50.9
Medtr7g446160 Medicago truncatula HOM05D000132 ORTHO05D000058 4.7e-07 57.4 43 55.8
arahy.Tifrunner.gnm1.ann1.EFQ1ZF Arachis hypogaea HOM05D000132 ORTHO05D000058 6.2e-07 57.0 57 47.4
Eucgr.L02928 Eucalyptus grandis HOM05D000132 ORTHO05D000058 6.2e-07 57.0 35 62.9
Glyma.15G237200 Glycine max HOM05D000132 ORTHO05D000058 6.2e-07 57.0 58 51.7
Medtr7g081410 Medicago truncatula HOM05D000132 ORTHO05D000058 6.2e-07 57.0 52 63.5
Potri.012G124100 Populus trichocarpa HOM05D000132 ORTHO05D000058 6.2e-07 57.0 53 50.9
TPR.G38834 Trifolium pratense HOM05D000132 ORTHO05D000058 6.2e-07 57.0 71 46.5
TPR.G39144 Trifolium pratense HOM05D000132 ORTHO05D000058 6.2e-07 57.0 44 56.8
Medtr7g045510 Medicago truncatula HOM05D000132 ORTHO05D000058 8.1e-07 56.6 55 49.1
TPR.G34233 Trifolium pratense HOM05D000132 ORTHO05D000058 8.1e-07 56.6 52 53.8
arahy.Tifrunner.gnm1.ann1.VK0LBE Arachis hypogaea HOM05D000132 ORTHO05D000058 1.1e-06 56.2 54 51.9
Glyma.16G065500 Glycine max HOM05D000132 ORTHO05D000058 1.1e-06 56.2 55 49.1
Glyma.18G198000 Glycine max HOM05D000132 ORTHO05D000058 1.1e-06 56.2 42 59.5
Medtr7g045710 Medicago truncatula HOM05D000132 ORTHO05D000058 1.1e-06 56.2 54 48.1
Medtr7g081480 Medicago truncatula HOM05D000132 ORTHO05D000058 1.1e-06 56.2 55 56.4
Psat6g101640 Pisum sativum HOM05D000132 ORTHO05D000058 1.1e-06 56.2 53 52.8
TPR.G35539 Trifolium pratense HOM05D000132 ORTHO05D000058 1.1e-06 56.2 54 51.9
Eucgr.H00707 Eucalyptus grandis HOM05D000132 ORTHO05D000058 1.4e-06 55.8 35 60.0
Eucgr.L02210 Eucalyptus grandis HOM05D000132 ORTHO05D000058 1.4e-06 55.8 35 60.0
Glyma.18G198850 Glycine max HOM05D000132 ORTHO05D000058 1.4e-06 55.8 34 64.7
Manes.17G014950 Manihot esculenta HOM05D000132 ORTHO05D000058 1.4e-06 55.8 38 57.9
Medtr0365s0020 Medicago truncatula HOM05D000132 ORTHO05D000058 1.4e-06 55.8 51 51.0
Medtr0400s0030 Medicago truncatula HOM05D000132 ORTHO05D000058 1.4e-06 55.8 51 51.0
Medtr7g039330 Medicago truncatula HOM05D000132 ORTHO05D000058 1.4e-06 55.8 55 49.1
TPR.G35095 Trifolium pratense HOM05D000132 ORTHO05D000058 1.4e-06 55.8 54 51.9
VMungo1383G2394 Vigna mungo HOM05D000132 ORTHO05D000058 1.4e-06 55.8 38 60.5
Eucgr.F04321 Eucalyptus grandis HOM05D000132 ORTHO05D000058 1.8e-06 55.5 41 53.7
Eucgr.I00946 Eucalyptus grandis HOM05D000132 ORTHO05D000058 1.8e-06 55.5 41 53.7
arahy.Tifrunner.gnm1.ann1.QWX0SS Arachis hypogaea HOM05D000132 ORTHO05D000058 2.3e-06 55.1 49 55.1
TPR.G39140 Trifolium pratense HOM05D000132 ORTHO05D000058 2.3e-06 55.1 71 45.1
arahy.Tifrunner.gnm1.ann1.42YKQI Arachis hypogaea HOM05D000132 ORTHO05D000058 3.1e-06 54.7 54 51.9
Medtr0289s0040 Medicago truncatula HOM05D000132 ORTHO05D000058 3.1e-06 54.7 43 53.5
Phvul.011G182300 Phaseolus vulgaris HOM05D000132 ORTHO05D000058 3.1e-06 54.7 72 43.1
vmacro11766 Vaccinium macrocarpon HOM05D000132 ORTHO05D000058 4.0e-06 54.3 52 51.9
arahy.Tifrunner.gnm1.ann1.J3UUQ0 Arachis hypogaea HOM05D000132 ORTHO05D000058 5.2e-06 53.9 55 45.5
Ca_07588_v3 Cicer arietinum L. HOM05D000132 ORTHO05D000058 5.2e-06 53.9 35 68.6
Eucgr.H00704 Eucalyptus grandis HOM05D000132 ORTHO05D000058 5.2e-06 53.9 31 64.5
Potri.015G123800 Populus trichocarpa HOM05D000132 ORTHO05D000058 6.8e-06 53.5 56 46.4
Eucgr.C01183 Eucalyptus grandis HOM05D000132 ORTHO05D000058 8.9e-06 53.1 37 56.8
Eucgr.H00710 Eucalyptus grandis HOM05D000132 ORTHO05D000058 8.9e-06 53.1 34 58.8
Potri.015G123100 Populus trichocarpa HOM05D000132 ORTHO05D000058 8.9e-06 53.1 38 57.9
TPR.G40087 Trifolium pratense HOM05D000132 ORTHO05D000058 8.9e-06 53.1 51 52.9


User provided reference genes

Program Settings