Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 1.2e-146 523.1 263 100.0
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 3.5e-133 478.4 261 89.3
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 6.0e-133 477.6 261 89.3
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 3.8e-127 458.4 261 86.2
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 8.7e-124 447.2 261 84.7
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 2.2e-119 432.6 256 82.0
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 2.2e-119 432.6 261 80.8
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 3.8e-119 431.8 260 81.2
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 4.6e-117 424.9 262 78.6
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 7.9e-117 424.1 263 78.3
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 1.0e-116 423.7 259 79.2
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 1.3e-116 423.3 249 81.5
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 1.4e-102 376.7 252 67.5
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 6.1e-101 371.3 261 65.5
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 7.9e-101 370.9 257 68.1
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 3.0e-100 369.0 256 65.6
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 3.0e-100 369.0 252 66.3
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 6.7e-100 367.9 248 68.1
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 2.0e-99 366.3 250 66.0
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 2.6e-99 365.9 252 64.7
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 4.4e-99 365.2 252 65.5
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 7.4e-99 364.4 255 66.7
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 7.4e-99 364.4 255 67.1
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 9.7e-99 364.0 257 63.8
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.3e-98 363.6 251 67.3
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.7e-98 363.2 252 65.5
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 3.7e-98 362.1 261 67.0
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.8e-98 361.7 271 62.7
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 4.8e-98 361.7 250 65.6
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 4.8e-98 361.7 250 65.6
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 8.2e-98 360.9 253 67.2
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 8.2e-98 360.9 253 64.8
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 2.4e-97 359.4 251 67.7
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 5.3e-97 358.2 257 65.0
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 5.3e-97 358.2 247 67.2
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 5.3e-97 358.2 246 67.5
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 5.3e-97 358.2 254 66.1
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 6.9e-97 357.8 248 67.3
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 6.9e-97 357.8 255 65.1
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 1.5e-96 356.7 255 65.5
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 2.0e-96 356.3 253 66.0
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 2.0e-96 356.3 255 65.5
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 2.6e-96 355.9 247 67.6
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 5.9e-96 354.8 248 67.3
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 5.9e-96 354.8 252 65.1
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 1.0e-95 354.0 248 66.1
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.0e-95 354.0 252 61.9
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 1.3e-95 353.6 250 64.8
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 1.7e-95 353.2 254 63.8
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 1.7e-95 353.2 249 67.5
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 1.7e-95 353.2 246 66.3
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 2.2e-95 352.8 250 66.0
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 5.0e-95 351.7 240 65.4
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 5.0e-95 351.7 250 65.6
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 8.5e-95 350.9 255 65.9
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 8.5e-95 350.9 252 65.9
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.1e-94 350.5 251 64.9
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 1.1e-94 350.5 250 63.2
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 1.1e-94 350.5 250 62.8
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.1e-94 350.5 252 63.1
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 1.9e-94 349.7 249 64.7
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 2.5e-94 349.4 243 65.4
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 1.6e-93 346.7 249 65.1
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 4.7e-93 345.1 243 65.0
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 6.1e-93 344.7 250 64.0
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 7.9e-93 344.4 283 58.7
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 7.9e-93 344.4 251 64.5
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 1.4e-92 343.6 260 60.4
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.4e-92 343.6 252 64.3
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 1.4e-92 343.6 240 64.6
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 1.8e-92 343.2 253 61.3
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 3.0e-92 342.4 245 65.7
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 3.0e-92 342.4 268 61.6
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.2e-92 341.7 252 63.9
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 8.8e-92 340.9 252 61.5
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 1.5e-91 340.1 250 64.8
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 2.6e-91 339.3 252 63.5
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 3.3e-91 339.0 252 61.5
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 3.3e-91 339.0 243 62.6
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 7.4e-91 337.8 256 60.9
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 7.4e-91 337.8 248 62.1
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 9.7e-91 337.4 253 63.2
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 1.3e-90 337.0 250 64.0
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 1.7e-90 336.7 260 60.8
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 2.2e-90 336.3 250 63.2
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 4.8e-90 335.1 239 62.3
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 4.8e-90 335.1 248 65.3
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 4.8e-90 335.1 222 68.5
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 6.3e-90 334.7 265 61.1
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 5.3e-89 331.6 237 62.4
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 2.6e-88 329.3 257 61.1
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 7.7e-88 327.8 248 62.9
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.0e-87 327.4 256 59.4
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 1.3e-87 327.0 248 62.5
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.3e-87 327.0 248 62.5
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 1.3e-87 327.0 277 56.7
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.8e-87 325.5 255 61.6
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 6.5e-87 324.7 251 61.0
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 6.5e-87 324.7 251 61.0
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.5e-87 324.3 248 62.1
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 4.2e-86 322.0 246 59.8
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 2.7e-85 319.3 246 60.6
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.0e-84 317.4 255 61.6
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.8e-84 316.6 245 59.6
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 2.3e-84 316.2 255 55.7
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 4.0e-84 315.5 300 52.3
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 4.4e-83 312.0 274 56.6
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 7.5e-83 311.2 230 63.0
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 1.4e-81 307.0 254 60.6
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 6.5e-79 298.1 195 69.7
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 4.0e-76 288.9 217 59.9
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 7.0e-73 278.1 211 58.8
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 7.0e-73 278.1 184 70.7
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 9.1e-73 277.7 199 64.3
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 1.0e-71 274.2 169 73.4
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 2.9e-71 272.7 199 61.8
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 6.5e-71 271.6 250 53.6
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 6.5e-71 271.6 251 52.2
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 8.6e-71 271.2 199 61.8
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.0e-67 260.0 244 53.7
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 3.7e-66 255.8 225 51.6
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.2e-64 250.8 193 59.1
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.1e-62 244.2 236 47.9
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 2.4e-57 226.5 180 57.2
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 1.7e-55 220.3 209 51.2
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 3.9e-55 219.2 251 46.2
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.6e-53 213.8 171 57.3
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 6.2e-53 211.8 129 73.6
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 9.8e-51 204.5 197 52.3
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.7e-50 203.8 253 43.5
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 7.8e-48 194.9 132 69.7
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.3e-47 194.1 144 62.5
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 5.0e-47 192.2 221 43.0
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.1e-45 186.8 138 60.9
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 4.0e-44 182.6 126 68.3
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 2.0e-43 180.3 197 50.3
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 6.4e-42 175.3 128 60.9
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 8.3e-42 174.9 279 37.3
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 1.1e-41 174.5 266 37.6
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 4.6e-40 169.1 126 57.9
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.6e-35 153.3 108 63.9
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 9.9e-27 124.8 102 55.9
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 8.1e-21 105.1 65 69.2
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 2.4e-20 103.6 79 59.5
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.4e-17 94.4 58 74.1
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.6e-16 89.4 81 49.4
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 6.2e-13 79.0 68 45.6
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 1.4e-09 67.8 195 30.8


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