Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.1e-90 336.7 174 100.0
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 6.1e-49 198.0 184 64.7
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 2.0e-47 193.0 182 63.2
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 2.0e-44 183.0 109 81.7
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 2.0e-44 183.0 156 60.9
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 3.5e-44 182.2 177 59.9
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 7.7e-44 181.0 176 61.4
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 7.7e-44 181.0 137 67.2
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 2.2e-43 179.5 168 60.1
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.5e-42 176.8 140 63.6
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 7.2e-42 174.5 150 65.3
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 3.6e-41 172.2 152 61.2
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.4e-40 170.2 178 56.7
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.8e-40 169.9 148 64.2
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.8e-40 169.9 149 62.4
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 2.3e-40 169.5 147 63.3
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.3e-40 169.5 137 63.5
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 5.2e-40 168.3 106 76.4
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 6.7e-40 167.9 148 62.2
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 8.8e-40 167.5 106 74.5
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 1.2e-39 167.2 198 52.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.5e-39 166.8 106 74.5
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.5e-39 166.8 106 74.5
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 2.6e-39 166.0 140 64.3
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.6e-39 166.0 129 66.7
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 3.3e-39 165.6 158 58.9
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 3.3e-39 165.6 145 59.3
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.3e-39 165.6 106 76.4
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 5.7e-39 164.9 147 62.6
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 9.7e-39 164.1 174 54.6
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.7e-38 163.3 166 54.2
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.7e-38 163.3 166 54.2
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 2.2e-38 162.9 174 54.6
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.2e-38 162.9 181 54.7
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 3.7e-38 162.2 168 56.0
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.3e-38 161.4 166 54.2
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 8.2e-38 161.0 168 56.0
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.4e-37 160.2 145 62.1
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.4e-37 160.2 172 53.5
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 1.8e-37 159.8 169 55.6
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 1.8e-37 159.8 159 57.2
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 2.4e-37 159.5 110 70.9
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 2.4e-37 159.5 149 59.7
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 2.4e-37 159.5 165 54.5
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 4.1e-37 158.7 127 62.2
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 5.3e-37 158.3 110 70.9
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.3e-37 158.3 166 53.6
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 7.0e-37 157.9 110 70.9
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 9.1e-37 157.5 136 60.3
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 9.1e-37 157.5 134 61.2
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.6e-36 156.8 162 53.7
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 3.5e-36 155.6 107 73.8
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 3.5e-36 155.6 145 58.6
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 3.5e-36 155.6 133 62.4
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.0e-35 154.1 148 55.4
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.0e-35 154.1 148 55.4
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.0e-35 154.1 148 55.4
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.0e-35 154.1 111 68.5
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 2.2e-35 152.9 121 66.9
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 2.9e-35 152.5 152 55.9
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 2.9e-35 152.5 133 62.4
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 3.8e-35 152.1 109 69.7
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 3.8e-35 152.1 148 58.1
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 6.5e-35 151.4 133 60.2
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 6.5e-35 151.4 128 64.1
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 8.5e-35 151.0 159 54.1
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.9e-34 149.8 106 68.9
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 3.2e-34 149.1 148 53.4
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 9.4e-34 147.5 101 69.3
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.2e-33 147.1 157 52.2
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.6e-33 146.7 149 54.4
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 2.7e-33 146.0 154 51.3
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 2.7e-33 146.0 148 53.4
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 3.6e-33 145.6 161 52.8
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 6.1e-33 144.8 110 66.4
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 8.0e-33 144.4 146 54.8
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.4e-32 143.7 150 52.7
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 6.8e-32 141.4 146 50.7
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 2.0e-31 139.8 104 64.4
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 5.7e-31 138.3 131 57.3
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 9.8e-31 137.5 85 76.5
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.3e-30 137.1 107 64.5
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.1e-29 134.0 135 54.1
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 3.8e-27 125.6 111 54.1
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.9e-26 123.2 111 52.3
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 9.5e-26 120.9 101 56.4
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.4e-24 117.1 123 53.7
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 5.2e-24 115.2 147 49.7
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.2e-23 114.0 151 47.7
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.4e-21 107.1 100 60.0
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 5.9e-20 101.7 101 55.4
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 2.3e-19 99.8 128 53.9
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 7.3e-18 94.7 161 39.1
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 4.7e-17 92.0 135 43.7
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 2.3e-16 89.7 139 42.4
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 3.0e-16 89.4 110 51.8
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 3.0e-16 89.4 110 51.8
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 6.8e-16 88.2 152 42.8
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 4.4e-15 85.5 115 51.3
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.9e-14 82.8 53 71.7
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 1.2e-12 77.4 47 72.3
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.6e-12 77.0 42 78.6
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 4.6e-12 75.5 163 33.7
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 1.3e-11 73.9 110 42.7
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 2.3e-11 73.2 95 44.2
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.9e-11 72.4 60 63.3
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.1e-09 66.6 110 41.8


User provided reference genes

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