Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 1.9e-84 315.8 164 100.0
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 6.5e-69 264.2 139 97.8
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 5.5e-68 261.2 139 95.7
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 1.2e-67 260.0 139 95.0
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 2.7e-62 242.3 139 90.6
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 2.9e-61 238.8 139 87.1
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 6.1e-59 231.1 139 82.7
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.0e-57 226.1 141 83.0
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 7.5e-57 224.2 139 84.9
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.3e-56 223.4 139 84.9
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.3e-56 223.4 139 84.9
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.2e-56 222.6 139 84.9
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 2.2e-56 222.6 139 82.7
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.8e-56 222.2 139 84.2
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 2.8e-56 222.2 139 79.1
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 6.3e-56 221.1 139 82.0
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 4.1e-55 218.4 139 81.3
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 7.0e-55 217.6 139 81.3
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.2e-54 216.9 139 84.9
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 1.6e-54 216.5 139 81.3
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 2.0e-54 216.1 139 80.6
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 4.5e-54 214.9 139 80.6
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 5.9e-54 214.5 139 80.6
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 1.3e-53 213.4 139 80.6
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.3e-53 213.4 139 80.6
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 1.3e-53 213.4 139 80.6
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 1.7e-53 213.0 139 79.9
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 2.3e-53 212.6 139 82.0
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 2.9e-53 212.2 139 82.7
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 2.9e-53 212.2 139 81.3
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 1.9e-52 209.5 139 77.0
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 2.5e-52 209.1 139 79.9
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 2.5e-52 209.1 139 77.7
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 4.2e-52 208.4 139 80.6
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 4.2e-52 208.4 139 80.6
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 5.5e-52 208.0 139 81.3
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 5.5e-52 208.0 139 77.0
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 5.5e-52 208.0 139 77.0
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 7.2e-52 207.6 139 79.1
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 9.5e-52 207.2 139 78.4
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 9.5e-52 207.2 139 79.1
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 1.2e-51 206.8 139 79.1
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 1.2e-51 206.8 139 79.1
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 1.2e-51 206.8 139 79.9
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.2e-51 206.8 140 80.0
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.6e-51 206.5 139 81.3
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.8e-51 205.7 140 78.6
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.8e-51 205.7 140 78.6
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 2.8e-51 205.7 139 79.1
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.6e-51 205.3 139 78.4
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 4.7e-51 204.9 139 77.0
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 4.7e-51 204.9 139 77.7
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 6.1e-51 204.5 139 77.7
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 6.1e-51 204.5 139 77.7
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 8.0e-51 204.1 139 77.7
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 8.0e-51 204.1 139 81.3
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.4e-50 203.4 139 77.0
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.4e-50 203.4 139 77.0
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.3e-50 202.6 141 76.6
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 2.3e-50 202.6 139 79.1
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.0e-50 201.8 139 77.7
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.0e-50 201.8 139 77.7
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.0e-50 201.8 139 77.7
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 1.2e-49 200.3 138 79.0
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 2.6e-49 199.1 141 75.2
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 3.4e-49 198.7 139 78.4
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 4.4e-49 198.4 139 77.0
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 5.7e-49 198.0 141 75.9
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 7.5e-49 197.6 139 77.7
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 7.5e-49 197.6 139 76.3
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 7.5e-49 197.6 139 75.5
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 9.8e-49 197.2 139 77.0
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.3e-48 196.8 139 75.5
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 1.7e-48 196.4 142 73.2
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 2.2e-48 196.1 147 74.1
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.4e-47 193.4 139 76.3
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 1.4e-47 193.4 139 74.1
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 3.1e-47 192.2 140 77.9
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 5.4e-47 191.4 139 74.1
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 7.0e-47 191.0 139 70.5
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 7.0e-47 191.0 141 73.8
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.2e-46 190.3 139 74.8
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 4.5e-46 188.3 139 72.7
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 3.8e-45 185.3 142 71.1
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 3.8e-45 185.3 142 71.1
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 8.6e-45 184.1 144 74.3
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 1.5e-44 183.3 144 68.8
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 1.9e-44 183.0 115 80.9
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.9e-44 183.0 141 68.8
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.9e-44 183.0 144 68.8
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 4.3e-44 181.8 144 68.8
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 5.6e-44 181.4 143 72.0
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 7.3e-44 181.0 144 74.3
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 9.5e-44 180.6 143 69.9
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.1e-43 179.5 139 70.5
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.6e-43 178.7 139 70.5
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 4.7e-43 178.3 145 69.0
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 8.0e-43 177.6 139 70.5
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.0e-42 177.2 139 69.8
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.4e-42 176.8 149 67.1
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 5.2e-42 174.9 148 68.2
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 8.9e-42 174.1 139 67.6
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 1.5e-41 173.3 136 68.4
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 1.5e-41 173.3 136 68.4
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 2.6e-41 172.6 147 66.0
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 3.4e-41 172.2 149 66.4
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 3.7e-40 168.7 100 86.0
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 3.7e-40 168.7 124 74.2
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.4e-39 166.8 109 80.7
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 7.0e-39 164.5 147 61.9
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 3.5e-38 162.2 105 79.0
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 6.6e-37 157.9 121 70.2
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 1.5e-36 156.8 121 66.1
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 6.2e-35 151.4 134 61.9
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 1.8e-34 149.8 105 81.0
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.2e-32 142.9 139 61.9
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 4.9e-32 141.7 133 62.4
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 2.4e-31 139.4 139 59.0
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 3.2e-31 139.0 128 60.9
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 3.5e-30 135.6 86 81.4
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 5.0e-29 131.7 135 54.8
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 1.2e-27 127.1 135 52.6
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 6.2e-27 124.8 138 51.4
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 3.1e-26 122.5 85 72.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.5e-25 120.2 91 70.3
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.5e-25 120.2 91 70.3
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 7.1e-23 111.3 78 71.8
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 6.0e-22 108.2 80 65.0
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 1.5e-20 103.6 137 49.6
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.3e-20 102.4 79 67.1
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 2.4e-18 96.3 79 57.0
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.1e-18 95.9 71 66.2
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.1e-18 95.9 71 66.2
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 4.0e-18 95.5 158 44.3
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 5.8e-17 91.7 69 65.2
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 7.6e-17 91.3 132 40.2
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 9.9e-17 90.9 69 60.9
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 1.3e-16 90.5 71 63.4
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 8.4e-16 87.8 69 62.3
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.1e-15 87.4 69 60.9
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 5.6e-12 75.1 72 52.8
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.6e-11 73.6 72 52.8
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 4.7e-11 72.0 122 42.6
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 2.4e-10 69.7 141 38.3
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 1.5e-09 67.0 70 48.6
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 7.6e-09 64.7 83 44.6
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 9.3e-07 57.8 51 60.8
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 9.3e-07 57.8 72 40.3
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.0e-06 55.1 72 40.3


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