Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.3e-79 299.7 156 100.0
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.8e-68 262.7 157 91.7
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 2.0e-59 232.6 159 82.4
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 3.8e-58 228.4 156 82.1
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 3.8e-42 175.3 159 68.6
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 3.8e-42 175.3 159 68.6
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 2.5e-41 172.6 161 65.2
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 6.0e-40 167.9 159 64.2
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 3.0e-39 165.6 159 67.9
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 4.3e-38 161.8 159 61.6
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.3e-37 160.2 168 60.7
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.3e-37 160.2 168 60.7
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 4.1e-36 155.2 173 60.1
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 5.0e-34 148.3 167 59.9
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 7.2e-33 144.4 164 58.5
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 2.1e-32 142.9 166 54.8
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 4.6e-32 141.7 89 82.0
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 1.8e-31 139.8 132 65.9
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 2.3e-31 139.4 167 57.5
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.9e-31 138.7 144 59.7
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 6.7e-31 137.9 168 55.4
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 5.7e-30 134.8 175 53.7
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 7.4e-30 134.4 167 53.9
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 9.7e-30 134.0 174 54.0
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 1.7e-29 133.3 163 57.1
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 2.2e-29 132.9 168 56.0
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 2.2e-29 132.9 167 55.7
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 2.8e-29 132.5 183 51.9
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 2.8e-29 132.5 98 74.5
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.8e-29 132.5 147 57.8
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 3.7e-29 132.1 172 52.3
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 8.2e-29 131.0 138 60.1
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.4e-28 130.2 166 54.2
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.4e-28 130.2 166 54.2
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.4e-28 130.2 173 52.6
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.8e-28 129.8 92 75.0
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.4e-28 129.4 177 53.7
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 2.4e-28 129.4 161 53.4
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 2.4e-28 129.4 161 53.4
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 3.1e-28 129.0 168 54.2
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 4.1e-28 128.6 155 54.2
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 4.1e-28 128.6 166 53.6
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 5.3e-28 128.3 164 51.2
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 6.9e-28 127.9 169 51.5
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 9.1e-28 127.5 161 52.8
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 9.1e-28 127.5 161 52.8
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 9.1e-28 127.5 164 53.7
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.2e-27 127.1 174 52.3
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.2e-27 127.1 171 50.3
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 1.2e-27 127.1 174 52.3
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 1.5e-27 126.7 166 53.6
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.5e-27 126.7 178 48.9
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.5e-27 126.7 174 52.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 2.0e-27 126.3 172 50.6
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 3.4e-27 125.6 165 51.5
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.5e-27 125.2 176 51.1
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 5.9e-27 124.8 176 50.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 7.7e-27 124.4 167 50.3
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 1.3e-26 123.6 162 51.9
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.3e-26 123.6 173 51.4
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.3e-26 123.6 171 52.6
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 1.7e-26 123.2 135 58.5
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.7e-26 123.2 171 50.3
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.8e-26 122.1 91 72.5
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 3.8e-26 122.1 91 72.5
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 6.5e-26 121.3 169 50.9
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 8.5e-26 120.9 171 52.0
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 8.5e-26 120.9 97 68.0
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 1.1e-25 120.6 126 58.7
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.9e-25 119.8 165 52.1
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.5e-25 119.4 175 50.3
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 5.5e-25 118.2 119 58.8
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 5.5e-25 118.2 119 58.8
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 5.5e-25 118.2 164 53.0
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 7.2e-25 117.9 179 49.2
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 4.7e-24 115.2 172 50.6
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 4.7e-24 115.2 92 67.4
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 6.1e-24 114.8 181 49.2
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 7.9e-24 114.4 164 50.6
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.0e-23 114.0 169 52.1
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 2.3e-23 112.8 86 68.6
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 5.7e-22 108.2 90 66.7
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 1.3e-21 107.1 90 65.6
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 2.8e-21 105.9 161 49.7
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 3.7e-21 105.5 164 48.8
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.7e-21 105.5 164 48.8
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.8e-21 105.1 164 48.8
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.2e-21 104.4 168 49.4
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.4e-20 102.8 168 50.0
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 2.4e-20 102.8 172 46.5
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.1e-20 102.1 165 50.3
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 4.1e-20 102.1 171 48.0
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 5.3e-20 101.7 170 46.5
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 1.2e-19 100.5 137 53.3
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 2.0e-19 99.8 56 87.5
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 5.0e-18 95.1 63 77.8
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 3.2e-17 92.4 68 73.5
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 4.2e-17 92.0 172 45.9
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 4.2e-17 92.0 249 35.7
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 5.5e-17 91.7 68 70.6
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 1.6e-16 90.1 72 61.1
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 2.1e-16 89.7 140 47.9
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 4.7e-16 88.6 59 76.3
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 2.3e-15 86.3 92 54.3
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 3.9e-15 85.5 142 50.0
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 6.7e-15 84.7 66 68.2
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 2.0e-14 83.2 139 45.3
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 2.0e-14 83.2 125 47.2
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 7.4e-14 81.3 145 44.1
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.2e-11 73.9 67 56.7
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.3e-10 70.5 78 52.6
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.9e-09 66.6 75 49.3
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 5.5e-09 65.1 43 69.8
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.0e-07 60.8 94 46.8
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 2.0e-06 56.6 141 40.4


User provided reference genes

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