Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G190200 Glycine max HOM05D007828 ORTHO05D009889 6.9e-135 484.2 284 100.0
Phvul.004G163000 Phaseolus vulgaris HOM05D007828 ORTHO05D009889 1.8e-82 310.1 294 71.8
VMungo0464G0263 Vigna mungo HOM05D007828 ORTHO05D009889 2.2e-64 250.0 291 63.6
CiPaw.04G164600 Carya illinoinensis HOM05D007828 ORTHO05D009889 5.3e-50 202.2 309 48.9
Prupe.7G230300 Prunus persica HOM05D007828 ORTHO05D009889 1.2e-49 201.1 323 48.9
Thecc.09G111200 Theobroma cacao HOM05D007828 ORTHO05D009889 1.2e-49 201.1 317 48.3
Glyma.07G086700 Glycine max HOM05D007828 ORTHO05D009889 1.9e-47 193.7 182 73.6
Glyma.08G038800 Glycine max HOM05D007828 ORTHO05D009889 1.6e-46 190.7 289 51.2
Cpa.g.sc810.5 Carica papaya HOM05D007828 ORTHO05D009889 7.9e-46 188.3 314 47.1
Ciclev10010509m.g Citrus clementina HOM05D007828 ORTHO05D009889 7.9e-46 188.3 311 47.3
Cfa003261 Carpinus fangiana HOM05D007828 ORTHO05D009889 2.3e-45 186.8 287 51.9
Lj2g0009665 Lotus japonicus HOM05D007828 ORTHO05D009889 3.0e-45 186.4 308 53.2
Lj4g0015011 Lotus japonicus HOM05D007828 ORTHO05D009889 3.0e-45 186.4 314 46.8
Manes.03G019900 Manihot esculenta HOM05D007828 ORTHO05D009889 5.1e-45 185.7 294 50.3
CsaV3_1G030510 Cucumis sativus L. HOM05D007828 ORTHO05D009889 8.7e-45 184.9 322 46.3
Glyma.05G231300 Glycine max HOM05D007828 ORTHO05D009889 1.1e-44 184.5 290 50.3
Medtr6g086505 Medicago truncatula HOM05D007828 ORTHO05D009889 1.6e-43 180.6 302 50.0
Haze_25710 Corylus avellana HOM05D007828 ORTHO05D009889 2.1e-43 180.3 289 50.2
Duzib187G0623 Durio zibethinus HOM05D007828 ORTHO05D009889 2.1e-43 180.3 308 47.4
Phvul.002G313500 Phaseolus vulgaris HOM05D007828 ORTHO05D009889 4.0e-42 176.0 299 48.8
TWI63G1614 Tripterygium wilfordii HOM05D007828 ORTHO05D009889 3.4e-41 172.9 306 46.1
Dinv41596 Davidia involucrata HOM05D007828 ORTHO05D009889 4.5e-41 172.6 293 53.6
TAR636G3628 Trochodendron aralioides HOM05D007828 ORTHO05D009889 5.8e-41 172.2 290 46.2
Sed0012449 Sechium edule HOM05D007828 ORTHO05D009889 1.0e-40 171.4 309 44.0
Lalb_Chr14g0371491 Lupinus albus HOM05D007828 ORTHO05D009889 1.3e-40 171.0 322 48.4
Potri.018G079400 Populus trichocarpa HOM05D007828 ORTHO05D009889 1.3e-40 171.0 312 45.2
Gohir.A06G062100 Gossypium hirsutum HOM05D007828 ORTHO05D009889 4.9e-40 169.1 290 48.3
VMungo0251G2715 Vigna mungo HOM05D007828 ORTHO05D009889 4.9e-40 169.1 302 48.3
Gorai.010G070300 Gossypium raimondii HOM05D007828 ORTHO05D009889 1.4e-39 167.5 290 48.3
Psat1g042080 Pisum sativum HOM05D007828 ORTHO05D009889 1.4e-39 167.5 299 52.2
Gohir.D06G060400 Gossypium hirsutum HOM05D007828 ORTHO05D009889 5.5e-39 165.6 290 46.9
TAR624G0153 Trochodendron aralioides HOM05D007828 ORTHO05D009889 7.1e-39 165.2 279 46.6
MD02G1047900 Malus domestica HOM05D007828 ORTHO05D009889 1.2e-38 164.5 320 48.4
MELO3C025334.2 Cucumis melo HOM05D007828 ORTHO05D009889 2.1e-38 163.7 284 46.5
PGR142G3024 Punica granatum HOM05D007828 ORTHO05D009889 2.1e-38 163.7 287 43.9
FAN26G0421 Fragaria x ananassa HOM05D007828 ORTHO05D009889 3.5e-38 162.9 309 50.5
Sed0011451 Sechium edule HOM05D007828 ORTHO05D009889 6.0e-38 162.2 317 43.5
QL02p085484 Quercus lobata HOM05D007828 ORTHO05D009889 2.3e-37 160.2 289 49.1
Cc06_g09610 Coffea canephora HOM05D007828 ORTHO05D009889 6.7e-37 158.7 302 44.4
COL.COLO4_34914 Corchorus olitorius HOM05D007828 ORTHO05D009889 8.7e-37 158.3 324 46.3
Manes.16G116600 Manihot esculenta HOM05D007828 ORTHO05D009889 4.3e-36 156.0 300 45.7
FvH4_1g04931 Fragaria vesca HOM05D007828 ORTHO05D009889 7.4e-36 155.2 306 50.0
RcHm_v2.0_Chr2g0090531 Rosa chinensis HOM05D007828 ORTHO05D009889 1.6e-35 154.1 310 47.4
FAN19G0878 Fragaria x ananassa HOM05D007828 ORTHO05D009889 2.1e-35 153.7 306 49.3
Actinidia20352 Actinidia chinensis HOM05D007828 ORTHO05D009889 2.8e-35 153.3 288 47.6
Atru.chr7.1344 Acer truncatum HOM05D007828 ORTHO05D009889 1.4e-34 151.0 304 45.4
Duzib168G1738 Durio zibethinus HOM05D007828 ORTHO05D009889 1.0e-32 144.8 222 45.9
EL10Ac8g18503 Beta vulgaris HOM05D007828 ORTHO05D009889 6.5e-32 142.1 319 43.6
Ah.14g081900 Amaranthus hybridus HOM05D007828 ORTHO05D009889 1.6e-30 137.5 285 43.9
Lsat_1_v5_gn_7_40641 Lactuca sativa HOM05D007828 ORTHO05D009889 4.6e-30 136.0 284 43.3
Actinidia09414 Actinidia chinensis HOM05D007828 ORTHO05D009889 5.1e-29 132.5 264 43.2
PSO782G3184 Papaver somniferum HOM05D007828 ORTHO05D009889 8.7e-29 131.7 296 40.2
Oeu013432.1 Olea europaea HOM05D007828 ORTHO05D009889 1.1e-28 131.3 282 42.6
Rhsim03G0242900 Rhododendron simsii HOM05D007828 ORTHO05D009889 9.7e-28 128.3 279 42.7
Lsat_1_v5_gn_5_103381 Lactuca sativa HOM05D007828 ORTHO05D009889 8.2e-27 125.2 284 40.8
DCAR_028715 Daucus carota HOM05D007828 ORTHO05D009889 2.4e-26 123.6 278 39.2
THA.LOC104811107 Tarenaya hassleriana HOM05D007828 ORTHO05D009889 4.5e-25 119.4 285 41.8
AUR62021512 Chenopodium quinoa HOM05D007828 ORTHO05D009889 6.5e-24 115.5 276 38.0
Lalb_Chr22g0352821 Lupinus albus HOM05D007828 ORTHO05D009889 6.5e-24 115.5 285 41.8
PSO063G6099 Papaver somniferum HOM05D007828 ORTHO05D009889 4.2e-23 112.8 329 35.9
TPR.G35269 Trifolium pratense HOM05D007828 ORTHO05D009889 6.7e-21 105.5 211 42.7
Dinv36622 Davidia involucrata HOM05D007828 ORTHO05D009889 2.0e-20 104.0 236 44.1
Ah.09g227940 Amaranthus hybridus HOM05D007828 ORTHO05D009889 2.8e-19 100.1 209 37.8
Gorai.001G005100 Gossypium raimondii HOM05D007828 ORTHO05D009889 4.1e-18 96.3 195 41.5
MBI15_g13431_MAGBIO Magnolia biondii HOM05D007828 ORTHO05D009889 5.9e-17 92.4 210 36.7
ECA240G1757 Erigeron canadensis HOM05D007828 ORTHO05D009889 1.3e-16 91.3 208 36.1
Lj7C649T8 Lonicera japonica HOM05D007828 ORTHO05D009889 8.5e-16 88.6 196 39.3
Gohir.A07G006450 Gossypium hirsutum HOM05D007828 ORTHO05D009889 9.4e-15 85.1 203 39.9
A06p39980 Brassica napus HOM05D007828 ORTHO05D009889 2.3e-13 80.5 291 32.0
BraA06t26913Z Brassica rapa HOM05D007828 ORTHO05D009889 2.3e-13 80.5 291 32.0
BcaC06g33685 Brassica carinata HOM05D007828 ORTHO05D009889 4.4e-12 76.3 284 34.2
Sc18g0001180 Simmondsia chinensis HOM05D007828 ORTHO05D009889 5.7e-12 75.9 291 34.0
CARHR154000 Cardamine hirsuta HOM05D007828 ORTHO05D009889 2.8e-11 73.6 284 32.0
C07p38190 Brassica napus HOM05D007828 ORTHO05D009889 3.7e-11 73.2 292 32.9
BolC7t44341H Brassica oleracea HOM05D007828 ORTHO05D009889 3.7e-11 73.2 292 32.9
Nn8g39203 Nelumbo nucifera HOM05D007828 ORTHO05D009889 3.7e-11 73.2 100 49.0
AT3G29300 Arabidopsis thaliana HOM05D007828 ORTHO05D009889 6.3e-11 72.4 289 32.5
Sp2g17900 Schrenkiella parvula HOM05D007828 ORTHO05D009889 8.2e-11 72.0 286 33.9
HanXRQChr03g0061871 Helianthus annuus HOM05D007828 ORTHO05D009889 2.6e-09 67.0 212 31.1
PGSC0003DMG400000314 Solanum tuberosum HOM05D007828 ORTHO05D009889 1.3e-08 64.7 116 42.2
Thhalv10004856m.g Eutrema salsugineum HOM05D007828 ORTHO05D009889 1.7e-08 64.3 304 33.6
ATR1134G058 Amborella trichopoda HOM05D007828 ORTHO05D009889 1.5e-07 61.2 190 34.2
AL5G19330 Arabidopsis lyrata HOM05D007828 ORTHO05D009889 8.0e-06 55.5 289 33.9


User provided reference genes

Program Settings