Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G182800 Glycine max HOM05D000003 ORTHO05D000006 8.3e-34 146.4 69 100.0
Glyma.18G124400 Glycine max HOM05D000003 ORTHO05D000006 2.2e-18 95.1 67 58.2
Glyma.06G180900 Glycine max HOM05D000003 ORTHO05D000006 1.4e-17 92.4 67 58.2
Glyma.10G082200 Glycine max HOM05D002777 ORTHO05D000006 2.6e-11 71.6 58 51.7
Lalb_Chr12g0203751 Lupinus albus HOM05D036797 ORTHO05D036533 8.4e-10 66.6 57 49.1
Medtr5g054740 Medicago truncatula HOM05D008558 ORTHO05D011658 2.4e-09 65.1 67 46.3
Lj1g0006455 Lotus japonicus HOM05D000003 ORTHO05D000006 7.1e-09 63.5 67 38.8
Medtr7g057470 Medicago truncatula HOM05D000003 ORTHO05D000006 9.3e-09 63.2 67 40.3
Medtr7g057490 Medicago truncatula HOM05D000003 ORTHO05D000006 9.3e-09 63.2 67 40.3
Medtr7g108440 Medicago truncatula HOM05D002777 ORTHO05D001516 2.1e-08 62.0 63 44.4
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 4.6e-08 60.8 62 37.1
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.9e-08 60.1 65 43.1
CSS0004052 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.0e-07 59.7 67 40.3
Medtr0426s0010 Medicago truncatula HOM05D000003 ORTHO05D000006 1.8e-07 58.9 67 38.8
TPR.G27496 Trifolium pratense HOM05D000003 ORTHO05D000004 2.3e-07 58.5 67 38.8
CSS0032143 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.0e-07 58.2 66 40.9
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 3.0e-07 58.2 63 42.9
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-07 57.8 58 48.3
CiPaw.14G024500 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-07 57.4 66 42.4
Phvul.010G087401 Phaseolus vulgaris HOM05D000003 ORTHO05D000006 5.1e-07 57.4 67 40.3
TPR.G35686 Trifolium pratense HOM05D000003 ORTHO05D000006 5.1e-07 57.4 67 40.3
Cpa.g.sc7.211 Carica papaya HOM05D000003 ORTHO05D000006 6.7e-07 57.0 65 40.0
Medtr1g068728 Medicago truncatula HOM05D000003 ORTHO05D000006 6.7e-07 57.0 67 38.8
CiPaw.03G074300 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.7e-07 56.6 58 44.8
CiPaw.06G024700 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.7e-07 56.6 58 43.1
CSS0013558 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.9e-06 55.5 66 39.4
CiPaw.02G076700 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.9e-06 55.5 58 43.1
CiPaw.14G112600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.9e-06 55.5 59 45.8
Gohir.A09G018865 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.9e-06 55.5 68 35.3
CiPaw.01G094800 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.5e-06 55.1 58 43.1
CiPaw.11G119300 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.5e-06 55.1 61 42.6
Gohir.A13G074451 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.5e-06 55.1 64 37.5
Medtr7g083690 Medicago truncatula HOM05D000003 ORTHO05D000004 2.5e-06 55.1 67 35.8
PSO170G4394 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-06 55.1 50 50.0
CiPaw.10G022700 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.3e-06 54.7 58 43.1
CSS0020053 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-06 53.9 67 38.8
Cpa.g.sc138.24 Carica papaya HOM05D000003 ORTHO05D000006 5.6e-06 53.9 66 36.4
CiPaw.12G029100 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.6e-06 53.9 58 41.4
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 5.6e-06 53.9 68 35.3
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 7.4e-06 53.5 61 42.6


User provided reference genes

Program Settings