Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G175100 Glycine max HOM05D000162 ORTHO05D000090 1.6e-17 95.1 45 100.0
Glyma.09G175200 Glycine max HOM05D000162 ORTHO05D000090 6.0e-17 93.2 45 97.8
Glyma.09G178300 Glycine max HOM05D000162 ORTHO05D000090 1.1e-15 89.0 43 97.7
Glyma.09G176400 Glycine max HOM05D000162 ORTHO05D000090 4.3e-15 87.0 45 95.6
Glyma.09G176600 Glycine max HOM05D000162 ORTHO05D009715 9.6e-15 85.9 42 97.6
Glyma.09G171200 Glycine max HOM05D000162 ORTHO05D000090 1.6e-14 85.1 40 100.0
Glyma.09G174800 Glycine max HOM05D000162 ORTHO05D000090 1.6e-14 85.1 40 100.0
Glyma.09G175800 Glycine max HOM05D000162 ORTHO05D000090 1.6e-14 85.1 40 100.0
Glyma.07G101300 Glycine max HOM05D000162 ORTHO05D000090 8.2e-14 82.8 44 88.6
Glyma.09G175300 Glycine max HOM05D000162 ORTHO05D000090 1.3e-11 75.5 45 80.0
Glyma.07G100300 Glycine max HOM05D000162 ORTHO05D000090 9.3e-10 69.3 45 73.3
Glyma.16G165400 Glycine max HOM05D000162 ORTHO05D000090 2.1e-09 68.2 45 66.7
Glyma.16G162000 Glycine max HOM05D000162 ORTHO05D000090 4.6e-09 67.0 45 68.9
Glyma.16G162100 Glycine max HOM05D000162 ORTHO05D000090 7.9e-09 66.2 45 64.4
Glyma.16G139800 Glycine max HOM05D000162 ORTHO05D000090 1.8e-08 65.1 45 66.7
Glyma.16G162800 Glycine max HOM05D000162 ORTHO05D000090 2.3e-08 64.7 44 68.2
Ca_07240_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 3.0e-08 64.3 43 65.1
Lalb_Chr19g0124651 Lupinus albus HOM05D000162 ORTHO05D000090 5.1e-08 63.5 44 63.6
arahy.Tifrunner.gnm1.ann1.JX1V6X Arachis hypogaea HOM05D000162 ORTHO05D000090 6.7e-08 63.2 45 68.9
Lj2g0020035 Lotus japonicus HOM05D000162 ORTHO05D000090 8.7e-08 62.8 45 64.4
Lj2g0016488 Lotus japonicus HOM05D000162 ORTHO05D000090 1.1e-07 62.4 45 62.2
arahy.Tifrunner.gnm1.ann1.H0USGJ Arachis hypogaea HOM05D000162 ORTHO05D000090 1.5e-07 62.0 45 66.7
Lj2g0019760 Lotus japonicus HOM05D000162 ORTHO05D000090 1.5e-07 62.0 45 60.0
Lj5g0021684 Lotus japonicus HOM05D000162 ORTHO05D000090 1.5e-07 62.0 45 62.2
arahy.Tifrunner.gnm1.ann1.7P90FF Arachis hypogaea HOM05D000162 ORTHO05D000090 1.9e-07 61.6 45 66.7
arahy.Tifrunner.gnm1.ann1.F89RUX Arachis hypogaea HOM05D000162 ORTHO05D000090 1.9e-07 61.6 44 68.2
arahy.Tifrunner.gnm1.ann1.PCZF7N Arachis hypogaea HOM05D000162 ORTHO05D000090 1.9e-07 61.6 45 66.7
Glyma.09G256600 Glycine max HOM05D000162 ORTHO05D000090 1.9e-07 61.6 45 62.2
Glyma.16G160700 Glycine max HOM05D000162 ORTHO05D000090 1.9e-07 61.6 45 62.2
arahy.Tifrunner.gnm1.ann1.E5VRK2 Arachis hypogaea HOM05D000162 ORTHO05D000090 2.5e-07 61.2 45 66.7
Lj2g0002093 Lotus japonicus HOM05D000162 ORTHO05D000090 2.5e-07 61.2 45 60.0
LjContig00222g0017251 Lotus japonicus HOM05D000162 ORTHO05D000090 2.5e-07 61.2 45 66.7
Lj1g0025377 Lotus japonicus HOM05D000162 ORTHO05D000090 3.3e-07 60.8 44 65.9
arahy.Tifrunner.gnm1.ann1.2SML7K Arachis hypogaea HOM05D000162 ORTHO05D000090 4.3e-07 60.5 45 64.4
arahy.Tifrunner.gnm1.ann1.VZ16Z8 Arachis hypogaea HOM05D000162 ORTHO05D000090 4.3e-07 60.5 44 63.6
Ca_28547_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 4.3e-07 60.5 43 65.1
Glyma.16G163100 Glycine max HOM05D000162 ORTHO05D000090 4.3e-07 60.5 45 57.8
Ca_11439_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 5.7e-07 60.1 45 62.2
arahy.Tifrunner.gnm1.ann1.1XK2C4 Arachis hypogaea HOM05D000162 ORTHO05D000090 7.4e-07 59.7 44 65.9
Ca_27472_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 7.4e-07 59.7 45 60.0
Lj2g0007420 Lotus japonicus HOM05D000162 ORTHO05D000090 7.4e-07 59.7 46 65.2
Lj2g0007462 Lotus japonicus HOM05D000162 ORTHO05D000090 9.7e-07 59.3 41 63.4
Lj2g0018884 Lotus japonicus HOM05D000162 ORTHO05D000090 9.7e-07 59.3 45 60.0
arahy.Tifrunner.gnm1.ann1.13BEBU Arachis hypogaea HOM05D000162 ORTHO05D000090 1.3e-06 58.9 45 60.0
arahy.Tifrunner.gnm1.ann1.1L2IGB Arachis hypogaea HOM05D000162 ORTHO05D000090 1.3e-06 58.9 45 60.0
arahy.Tifrunner.gnm1.ann1.N6PQGP Arachis hypogaea HOM05D000162 ORTHO05D000090 1.3e-06 58.9 45 64.4
arahy.Tifrunner.gnm1.ann1.NHRK07 Arachis hypogaea HOM05D000162 ORTHO05D000090 1.3e-06 58.9 45 60.0
arahy.Tifrunner.gnm1.ann1.P4UTRN Arachis hypogaea HOM05D000445 ORTHO05D000090 1.3e-06 58.9 45 60.0
arahy.Tifrunner.gnm1.ann1.SW1UT6 Arachis hypogaea HOM05D000162 ORTHO05D000090 1.3e-06 58.9 45 60.0
arahy.Tifrunner.gnm1.ann1.WNF3YY Arachis hypogaea HOM05D000162 ORTHO05D000090 1.3e-06 58.9 45 60.0
Lj1g0016855 Lotus japonicus HOM05D000162 ORTHO05D000090 1.3e-06 58.9 41 68.3
Lj2g0001873 Lotus japonicus HOM05D000162 ORTHO05D000090 1.3e-06 58.9 45 60.0
arahy.Tifrunner.gnm1.ann1.MU7Y6R Arachis hypogaea HOM05D000162 ORTHO05D000090 1.6e-06 58.5 44 63.6
Glyma.16G161900 Glycine max HOM05D000162 ORTHO05D000090 1.6e-06 58.5 45 57.8
Lj2g0003719 Lotus japonicus HOM05D000162 ORTHO05D000090 1.6e-06 58.5 41 65.9
arahy.Tifrunner.gnm1.ann1.81C096 Arachis hypogaea HOM05D000162 ORTHO05D000090 2.2e-06 58.2 44 63.6
arahy.Tifrunner.gnm1.ann1.83WUCG Arachis hypogaea HOM05D000162 ORTHO05D000090 2.2e-06 58.2 45 60.0
Glyma.U031315 Glycine max HOM05D000162 ORTHO05D000090 2.2e-06 58.2 26 96.2
arahy.Tifrunner.gnm1.ann1.ZZ4RN5 Arachis hypogaea HOM05D000162 ORTHO05D000090 2.8e-06 57.8 45 62.2
Medtr7g012890 Medicago truncatula HOM05D000162 ORTHO05D000090 2.8e-06 57.8 47 61.7
arahy.Tifrunner.gnm1.ann1.JFA2W2 Arachis hypogaea HOM05D000162 ORTHO05D000090 3.7e-06 57.4 45 57.8
arahy.Tifrunner.gnm1.ann1.4NT8ND Arachis hypogaea HOM05D000239 ORTHO05D000090 4.8e-06 57.0 45 57.8
arahy.Tifrunner.gnm1.ann1.90C2FA Arachis hypogaea HOM05D000162 ORTHO05D000090 4.8e-06 57.0 45 60.0
arahy.Tifrunner.gnm1.ann1.BXHN9I Arachis hypogaea HOM05D000162 ORTHO05D000090 4.8e-06 57.0 45 60.0
arahy.Tifrunner.gnm1.ann1.FA2NZF Arachis hypogaea HOM05D000239 ORTHO05D000090 4.8e-06 57.0 45 57.8
arahy.Tifrunner.gnm1.ann1.XENT32 Arachis hypogaea HOM05D000162 ORTHO05D000090 4.8e-06 57.0 45 57.8
Lj2g0024187 Lotus japonicus HOM05D000162 ORTHO05D000090 4.8e-06 57.0 45 57.8
arahy.Tifrunner.gnm1.ann1.D88Z08 Arachis hypogaea HOM05D000162 ORTHO05D000090 6.3e-06 56.6 45 57.8
arahy.Tifrunner.gnm1.ann1.IGD5ZI Arachis hypogaea HOM05D000239 ORTHO05D000090 6.3e-06 56.6 45 57.8
arahy.Tifrunner.gnm1.ann1.LFF0Y5 Arachis hypogaea HOM05D000162 ORTHO05D000090 6.3e-06 56.6 45 60.0
Lj2g0024735 Lotus japonicus HOM05D000162 ORTHO05D000090 6.3e-06 56.6 40 62.5
arahy.Tifrunner.gnm1.ann1.BX8F04 Arachis hypogaea HOM05D000162 ORTHO05D000090 8.2e-06 56.2 45 57.8
Ca_25312_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 8.2e-06 56.2 45 53.3


User provided reference genes

Program Settings