Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G173750 Glycine max HOM05D000367 ORTHO05D214074 1.2e-61 239.6 116 100.0
Glyma.07G103600 Glycine max HOM05D000367 ORTHO05D001438 1.2e-40 169.9 90 90.0
Phvul.004G149000 Phaseolus vulgaris HOM05D000367 ORTHO05D001438 1.4e-33 146.4 105 75.2
VMungo0464G1878 Vigna mungo HOM05D000367 ORTHO05D001438 1.5e-32 142.9 105 71.4
Lalb_Chr22g0353471 Lupinus albus HOM05D000367 ORTHO05D001438 5.3e-25 117.9 99 65.7
Medtr6g471050 Medicago truncatula HOM05D000367 ORTHO05D001438 3.0e-20 102.1 98 56.1
arahy.Tifrunner.gnm1.ann1.SE4CNR Arachis hypogaea HOM05D000367 ORTHO05D001438 1.5e-19 99.8 109 53.2
Lj2g0017828 Lotus japonicus HOM05D000367 ORTHO05D001438 2.6e-19 99.0 95 62.1
arahy.Tifrunner.gnm1.ann1.KKP5ML Arachis hypogaea HOM05D000367 ORTHO05D001438 7.5e-19 97.4 109 52.3
Psat1g030400 Pisum sativum HOM05D000367 ORTHO05D001438 1.7e-18 96.3 86 58.1
Phvul.006G032966 Phaseolus vulgaris HOM05D000367 ORTHO05D307411 3.1e-09 65.5 68 57.4
TWI60G1575 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 3.1e-09 65.5 111 36.9
RcHm_v2.0_Chr7g0178061 Rosa chinensis HOM05D000367 ORTHO05D001438 9.1e-09 63.9 94 42.6
Potri.015G035300 Populus trichocarpa HOM05D000367 ORTHO05D001438 1.2e-08 63.5 66 48.5
Haze_18900 Corylus avellana HOM05D000367 ORTHO05D001438 2.7e-08 62.4 111 40.5
Nn4g24317 Nelumbo nucifera HOM05D000367 ORTHO05D001438 7.7e-08 60.8 110 34.5
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.3e-07 60.1 39 69.2
Atru.chr9.1639 Acer truncatum HOM05D000367 ORTHO05D001438 1.7e-07 59.7 86 43.0
Sabra15G0029200 Salix brachista HOM05D000367 ORTHO05D001438 2.3e-07 59.3 96 39.6
Cfa020628 Carpinus fangiana HOM05D000367 ORTHO05D001438 2.9e-07 58.9 98 40.8
CANSAT80G1180 Cannabis sativa HOM05D000367 ORTHO05D001438 1.1e-06 57.0 104 34.6
Hma1.2p1_0471F.1_g159550 Hydrangea macrophylla HOM05D000367 ORTHO05D001438 1.1e-06 57.0 94 39.4
MBI19_g34085_MAGBIO Magnolia biondii HOM05D000367 ORTHO05D001438 5.5e-06 54.7 112 27.7
Duzib084G0788 Durio zibethinus HOM05D000367 ORTHO05D001438 7.2e-06 54.3 75 44.0
Cpa.g.sc3.370 Carica papaya HOM05D000367 ORTHO05D001438 9.5e-06 53.9 75 41.3


User provided reference genes

Program Settings